Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_20960
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Entry
APT59_20960 CDS
T04267
Name
(GenBank) sugar transporter
KO
K21009
polysaccharide biosynthesis protein PelD
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Pathway
por02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
por00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
APT59_20960
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Gene cluster
GFIT
Motif
Pfam:
PelD_GGDEF
GAF_3
GAF_2
GAF
Motif
Other DBs
NCBI-ProteinID:
ALZ86558
UniProt:
A0A0U4P863
LinkDB
All DBs
Position
4600679..4602052
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AA seq
457 aa
AA seq
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MALQSVHKDYTLAPRASGRLSWLETLLVTAAALGLGFWLVPEDPLMVGLAFPWVVFAPIL
MGVRYGFMRGLVSAALLVVALLYLHRQGYPAYEEIPPSFIVGVLLSAMLVGEFRDLWDRR
LERLDLANDYRQLRLDEFTRAHHLLRISHDRLEQRVAGNDLSLRSSLLDLRRQLREVPRE
QDALQALAEPIVGLLAQYGSLRVAGLYRVDGNGRVDRRALASQGEMPGIDPDDLLVRLTL
ERGETLSIRQALLERGETQHSALQACVPLLDTEERLLAVLAIEQMPFFSFNERTLNLLTI
LAGHIADLLGSDPQALALADDDAQQFSQHLKRSLRDAQQHALPACLFCFEMTEADGGERA
LALLEGSRRGLDLQLRLTNQAGHPCLLVLLPLTSSDGLEGYRRRLRQLLAERHGQDSTLE
SLGVRSHEHELLPKTRAQELRVFLFNECGLHEQQVAV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcaatccgtccacaaggactacaccctggcgcctcgcgccagtggccgcctg
tcctggctggaaaccctgctggtcacggcggccgccctgggcctgggcttctggcttgtg
ccggaagaccccttgatggtcggcctggcctttccctgggtggtgttcgcgcccatcctc
atgggggtgcgctatggcttcatgcgcggcctggtaagcgccgcgctgctggtggtggcg
ctgctctacctgcaccgccagggctatccggcctacgaagagattccaccgtcctttatc
gtcggcgtgctgctcagtgccatgctggtaggcgaattccgcgatctctgggaccgtcgc
ctggagcggctggacctggccaacgactatcgccagctgcgcctggacgaattcacccgc
gcccaccatctcttgcgcatctcccatgatcgcctggagcaacgcgtcgccggcaacgac
ctcagcctgcgcagctccctgctggacctgcgtcgccagctgcgcgaggtgccgcgcgag
caggatgcgctgcaggccctggccgagcccatcgtcggcctgctggcccagtacggttcg
ttgcgggtagccgggctctatcgggtcgacggcaacggccgagtggatcgccgcgccctc
gccagccagggcgagatgcccggcatcgatcccgacgacctgctggtgcgcctgaccctg
gagcgcggcgagaccctgagcatccgccaggcgctgctggaacgcggcgagacccagcat
tcggcgctgcaggcctgcgtgccgctgctggataccgaggagcggctgctggcggtgcta
gccatcgagcagatgccgttcttttccttcaatgagcgcaccctcaatctgctgaccatc
ctcgccggccacatcgccgacctgctgggcagcgatccccaggcgctggccctggccgac
gatgacgcccagcagttctcccagcacctcaagcgctcgctgcgcgatgcccagcagcac
gcgctgcccgcctgcctgttctgcttcgagatgaccgaggccgacggtggcgaacgggcc
ttggcgctgctggaaggcagccgccgcggcctcgacctgcagctgcgcctgaccaatcag
gctggccacccctgcctgctggtgctcctgccgctgacctcctccgatggcctggaaggc
tatcgccgccgcctgcgccagctgctggccgagcgccatggtcaggacagcaccctggaa
agcctgggcgtgcgcagccatgaacacgagctgctgcccaagacccgcgcccaggagttg
cgcgtcttcctgttcaacgagtgtggtctgcatgaacagcaagtggctgtttag
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