Pseudomonas oryzihabitans: APT59_21215
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Entry
APT59_21215 CDS
T04267
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
por
Pseudomonas oryzihabitans
Pathway
por03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
por00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
APT59_21215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
por03021
]
APT59_21215
03400 DNA repair and recombination proteins [BR:
por03400
]
APT59_21215
Enzymes [BR:
por01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
APT59_21215
Transcription machinery [BR:
por03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
APT59_21215
DNA repair and recombination proteins [BR:
por03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
APT59_21215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ALZ86606
UniProt:
A0A0U4P8B5
LinkDB
All DBs
Position
complement(4660424..4660696)
Genome browser
AA seq
90 aa
AA seq
DB search
MARVTVEDCLDNVDNRFELVMLATKRSRQLATGGKEPKVPWDNDKPTVVALREIAEGLVD
EEVIRLDDIVEEEPLFAAFEVNEEADGEAL
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgttactgtcgaagactgcctggacaacgtagacaaccgattcgagctggtc
atgctcgccaccaagcgctcgcgccagctggccaccggcggcaaggagcccaaggtaccg
tgggacaacgacaagcccaccgtcgtcgccctgcgcgagatcgccgaaggcctggtcgac
gaggaagtcatccgtctggacgacatcgtcgaagaagagccgctgttcgccgccttcgaa
gtcaacgaagaagcggacggcgaggcgctctaa
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