Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_21565
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Entry
APT59_21565 CDS
T04267
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
por
Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Pathway
por00260
Glycine, serine and threonine metabolism
por00460
Cyanoamino acid metabolism
por00630
Glyoxylate and dicarboxylate metabolism
por00670
One carbon pool by folate
por00680
Methane metabolism
por01100
Metabolic pathways
por01110
Biosynthesis of secondary metabolites
por01120
Microbial metabolism in diverse environments
por01200
Carbon metabolism
por01230
Biosynthesis of amino acids
por01240
Biosynthesis of cofactors
por04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
por00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
APT59_21565 (glyA)
09102 Energy metabolism
00680 Methane metabolism
APT59_21565 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
APT59_21565 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
APT59_21565 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
APT59_21565 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
APT59_21565 (glyA)
Enzymes [BR:
por01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
APT59_21565 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ALZ86673
UniProt:
A0A0U4P6V6
LinkDB
All DBs
Position
complement(4738743..4739996)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDALFAAMGEEARRQEHHLELIASENYTSQRVMEAQGSVLTNKYAEGYP
GKRYYGGCEHVDKVEQLAIERAKQLFGADYANVQPHSGSQANSAVYLALLQPGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGINTDTGLIDYDEIQRLAEEHKPKMIVAGFSAYSK
TLDFQRFRDIADSVGALLFVDMAHVAGLVAAGVYPNPVPFADVVTTTTHKTLRGPRGGLI
LCKANADIEKKLSAAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKTYQQQVIKNAQAMAG
VFKARGFDVVSGGTDNHLFLVSLIKQGITGKDADAALGRACITVNKNAVPNDPQSPFVTS
GLRIGTPALTTRGLGVSESERVAGWICDILDHLGDADVEAQVARQVAALCRDYPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaggaccaaatccagggctacgatgatgcgttgttcgccgccatgggc
gaggaagcgcggcgccaggagcatcacctggaactgatcgcatccgaaaactacaccagc
cagcgcgtcatggaagcccagggcagcgtgctgaccaacaagtacgccgaaggctatccg
ggcaagcgttactacggtggctgcgagcacgtcgacaaggtcgagcagctggccatcgag
cgcgccaagcagctgttcggcgccgactacgccaacgtccagccgcactccggctcccag
gccaactcggccgtctacctggcactgctgcaacccggcgacaccatcctgggcatgagc
ctggcccatggcggtcacctgacccacggcgccaaggtcagctcctccggcaagctgtac
aacgcggtgcagtacggcatcaacaccgacaccgggctgatcgactatgacgagatccag
cgtctggccgaagagcacaagcccaagatgatcgtggcgggcttctccgcctactccaag
accctggacttccagcgcttccgcgacatcgccgatagcgtgggcgccctgctgttcgtc
gacatggcccacgtggccggtctggtcgctgccggtgtctatccgaacccggtgcccttc
gccgacgtggtgaccaccaccacccacaagaccctgcgcggcccccgtggcggcctgatc
ctgtgcaaggccaacgccgacatcgagaagaagctcagcgccgcggtgttcccgggtgcc
cagggtggcccgctgatgcacgtcatcgccggcaaggccgtgtgcttcaaggaagccctg
gagccgggcttcaagacctaccagcagcaggtgatcaagaacgcccaggccatggccggc
gtgttcaaggcacgcggcttcgacgtggtgtccggcggtaccgataaccacctgttcctg
gtcagcctgatcaagcagggcatcaccggcaaggacgcggacgccgccctgggtcgcgcc
tgcatcaccgtgaacaagaacgccgtgcccaacgatccccagtcgcccttcgtgacctcg
ggtctgcgcatcggcaccccggccctgaccacccgtggtctgggcgtcagcgaaagcgag
cgcgtcgccggctggatctgcgacatcctcgaccacctcggcgatgccgatgtggaagcc
caggtggcgcgccaggtggctgcgctgtgccgcgactatccggtttaccgctaa
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