KEGG   Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_21665
Entry
APT59_21665       CDS       T04267                                 
Name
(GenBank) Fis family transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
por  Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Brite
KEGG Orthology (KO) [BR:por00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:por03000]
    APT59_21665
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:por02044]
    APT59_21665
Transcription factors [BR:por03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    APT59_21665
Secretion system [BR:por02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   APT59_21665
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 AAA_5 HTH_30 AAA_2 GAF AAA AAA_16 HTH_28 HTH_24 AAA_7 nSTAND3 HTH_50
Other DBs
NCBI-ProteinID: ALZ86693
UniProt: A0A0U4WF22
LinkDB
Position
4761802..4763301
AA seq 499 aa
MNLPSAPDAVLPLFLELAQLDDPTSLATALVDGICRLSRLDLVQYYRLDATHTQLVRLAQ
SLDGTAALTGEALPLEQESLLQYCLTQNRSLHLRELDPLLHASAFLPGEGWRSLGCLPLS
GPTGHVEGLLVQASRTTRLLEDHAELLTALGRFALAQSQLLERAQAAPMTSAAALPVTAA
ATADGFGMIGNGDAMRQVHRLIGKILHTSITVLLTGETGTGKELVARAIHERGSRRTQPF
VVQNCAALPEHLLESELFGYRKGAFTGAERDRTGLFDAANGGTLFLDEIGDMPLALQAKL
LRVLQEGEVRPLGSTETHRVDVRIIAATHRHLLRLVEQGTFREDLYYRLTHFPIQLPPLR
ERGEDLPLLARHFADQACACLQRSRCRWSSAALDLLVGHAFPGNVRELKGLVERAVLLCE
GNELLPEHFAIRPTTLGAGTSSLTLRERLDQLERGLLVDCLRKNRGNQTQAAQELGLPRR
TLLYRLQRLSIRSADLQLS
NT seq 1500 nt   +upstreamnt  +downstreamnt
atgaacttgcccagcgccccggacgccgtcctgccgctgttcctcgaactggcacaactc
gatgatcccacgtcgctcgcaacggccctggtcgacggtatctgccggctgagccgcctc
gacctggtgcagtactaccgcctcgacgccacccatactcaattggtaaggctcgcccag
agcctggatggcaccgccgccctgaccggcgaagcgctgcctctggaacaggaaagcctg
ctgcagtactgcctgacacagaatcgcagtctgcacctgcgcgaactggatccactgcta
cacgcctccgccttcctgcccggcgaaggctggcgcagtcttggctgccttcccttgagc
ggtcctaccggccacgtcgagggcttgctggtgcaggccagtcgcaccactcgattgctg
gaagaccatgccgaactcctgacggcgctcggccgcttcgccctggcgcagagccagctg
ctggagcgggcccaggcggcgcccatgacgagcgccgcagcgctacccgttacagcggct
gcgacagccgatggcttcggcatgatcggcaacggcgacgccatgcggcaggtccatcgg
ctgatcggcaagatactgcatacctccatcaccgtgctgctgaccggcgagaccggaacc
ggcaaggagctggtggcccgagccatccacgagcgtggctcgcgccgcacccagcccttc
gtggtacagaactgcgccgccctgcccgagcaccttctggaaagcgaactcttcggctac
cgcaagggtgcctttaccggtgccgagcgcgaccgcaccggcctcttcgatgcagccaat
ggcggcaccctgtttctcgacgagataggcgacatgccgctggccctgcaggccaagctc
ctgcgcgtgttgcaggaaggcgaggtgcggccgctgggcagcaccgagacccaccgagtg
gatgttcgcatcatcgcggctacccatcgccatctgctgcgcctggtcgaacaggggacc
ttccgtgaagacctctactatcgcctgacccactttcctatccagctgccacccctgcgc
gagcggggtgaagacctgccgctgctggcccggcatttcgccgaccaggcctgcgcctgc
ctgcagcgctcgcgctgccgctggtccagcgcggccctggacctgctggtgggccacgcc
tttccgggcaacgttcgcgaactcaagggcctggtggagcgcgccgtcctgctctgcgaa
ggcaacgagttgttgccagagcacttcgccattcgccccaccacgctcggcgcgggtacc
agcagcctgaccttgcgtgagcgcctggatcagctcgaacgcggcctgctggtggactgc
ctgcgcaagaaccgtggcaaccagacccaggctgcccaagagctgggactgccgcgccgc
accctgctctatcgcctgcagcgactgagcatccgcagtgccgacctgcaactttcctga

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