KEGG   Pseudomonas oryzihabitans USDA-ARS-USMARC-56511: APT59_21690
Entry
APT59_21690       CDS       T04267                                 
Name
(GenBank) type VI secretion protein VasK
  KO
K11891  type VI secretion system protein ImpL
Organism
por  Pseudomonas oryzihabitans USDA-ARS-USMARC-56511
Pathway
por02025  Biofilm formation - Pseudomonas aeruginosa
por03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:por00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    APT59_21690
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    APT59_21690
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:por02044]
    APT59_21690
Secretion system [BR:por02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   APT59_21690
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical AAA_29 DUF998
Other DBs
NCBI-ProteinID: ALZ86698
UniProt: A0A0U4HLU5
LinkDB
Position
4767356..4770799
AA seq 1147 aa
MKGFISALGRVLRRPWIWTLLAVLGLGSLVWTLGPLLAFAGHSPWASITHRLATLCGLFL
AWGLAMVLLQSWQQRQRRQRLASEEGQHDQERAERIDGEAHELQTRARAAYRTLHGAGLY
RGRSPRWRRELPHYLLLGPEGAGKTSLLDFSGLEFPLNTERSRLTRDISGTRHCDWYFAE
QGVLLDTAGRYLTQGDAPVDGSAWQTLLRLLRRQRRSRPLNGILVTLAVEQLAGGNEVAL
ETLARQVRARLHEVARELKVEVPVYLVLTQADRLPGFEAFFEGLSREESEQVLGTTFREA
QDGTDPGVLRQEFEELLRRLNSQVIPRIHQERDGQRRGQILDFPHQLSRLADGLTLFVEL
AFSGNRYQRAAQFRGFYLTSTPALTHSLDAQTQGIGDQLGLPSTLLPRYRSGQPRFIRQL
FNRVIFPEASLAGLDQRELRRLSWGQRGLYAAALAILALGAALWTTSFGSNHERLERLRE
LAQHGVQARSQLKAGADARAVLPILDNAYTGTQVFPAAGATSLGEHTGLYQGDAVRPTTE
AAYHQALETYLLPRLKAQLEERIRGSLGDRERLIGYLRAYLMLQLPERRDARALRDWAAA
DWSQRYRGDALTQNSLDTHLARLLEQGFGTYPVDAQLVSQARQVLRSESLAAVVYRVLRD
QASSLPVYRLSQHLGPQALTFEGADYPIPGFYTRQGYAQTFSTQGLAVIRDLAADNWVLG
DGDGITGMDLRHLQVELEQLYFRDYANQWSEALARVTLQPVGDANQGALLLAGLTSANSP
LLQLLVEVRNNTRLAAPAQEAAAQGEALPDAARRSLQNRFENLNRLLDDQGAPVADLAPA
MAALNDLQQQLAGLAHASVPDQVAFELAKTRMTGNRDALNSVRAASSRLPTPVNDWLGLL
VDDSWHLILAGAYDYINARYQSELLASYRNGLDKRYPFKADSESDVSLADFREFFKAQGT
ADTFFDTYLKPFVTRSESDAYRPRSIDGHSLPLSRDFLAQMGRTQQIRRGFFAENPAEPG
IVFKLEPYSLDPNLTRADLNIGKERLEYRHGPIVATTFRWPQNDALRTTLVLEELGGRRV
GLEQDGSAWSLFRLLDRMKLQQHSARDVLLVQADLDGRHAGYLLSSQRSPNPFDLATLRG
FRLPERL
NT seq 3444 nt   +upstreamnt  +downstreamnt
atgaaaggattcatctctgcactcgggcgggtgctgcgccgcccctggatctggacactg
ctggcggtcctagggctaggcagcctggtctggaccctgggtccgctgctggccttcgcc
ggccatagtccttgggcttcgattacccaccgcctggctaccctttgcggtctattcctg
gcctggggcctggccatggtactgctgcaaagctggcagcagcgccaacgccggcagcgc
ctggccagcgaggaaggccagcatgaccaggagcgtgccgaacgcatcgatggcgaggcc
cacgaactgcagacccgtgctcgcgccgcctaccgcaccctgcacggtgccggcctctac
cgggggcgtagcccgcgttggcggcgcgagctgccgcactacctgctgctgggtccggaa
ggcgcaggcaagacctcgctgctggacttctccggtctggagtttccgctcaacacagag
cgctctcggctgacccgtgacatcagcggcacccggcattgcgactggtacttcgccgaa
cagggcgtgctgctggacaccgccggccgctatctgacccagggcgacgctccagtggac
ggcagcgcctggcagaccctgctgcggctgctacgccgccagcggcgtagccgtccgctc
aacggcatcctcgtcaccctggcggtagagcagctggctggcggcaacgaagttgccctg
gaaaccctggcgcgccaggtacgcgcccggctgcacgaggtggcacgagaactcaaggtc
gaggtgcccgtctacctggtgctgacccaggccgatcgtctacctggcttcgaggccttc
ttcgagggtctctcccgcgaggaaagcgagcaggtgctgggcaccacctttcgtgaagcc
caagacggcactgaccccggtgtgctacgccaggagttcgaggaattgctgcgccggctc
aacagccaggtcatcccgcgcatccaccaagagcgcgacggccaacgccgcggccagatc
ctcgactttccccatcagctgagccgtctggctgacggcctcaccctgttcgtcgaactg
gccttttccggtaatcgctaccagcgcgccgcccagttccgcggcttctacctaaccagc
accccggcgctgacccacagtctcgacgcccagacccagggcatcggcgatcagcttggc
ctacccagtaccctgttgccccgctaccgcagcggtcagccgcgcttcatccgccagctg
ttcaaccgggtgatctttcccgaggcttccctggccggcctcgatcagcgtgagctgcgc
cgcctgagctgggggcagcgcggtctctatgccgcagccttggctatcctggccctgggt
gcagcgctttggacgaccagcttcggtagcaaccacgaacgcctggaacgactgcgtgaa
ctggcgcagcacggcgtacaggcacgcagccagctcaaggctggtgccgatgcccgtgcc
gtcctgccgatattggacaatgcctatactggcacccaggtctttcctgcggctggcgcc
acctcactaggcgagcacaccgggctctatcagggcgatgcggtacgccccaccaccgag
gcagcctatcaccaggcgctggaaacctatttgctgccgcgcctcaaggcacagctggag
gagcgcatccgtggcagtctcggcgaccgcgagcgactgatcggttacctgcgtgcctac
ctgatgctgcaattgcccgagcgccgggacgcccgcgccttgcgcgactgggccgccgcc
gactggtcgcagcgctatcgcggtgatgcccttacccagaacagcctggatactcacctg
gcccggctgcttgaacagggcttcggtacctatccggtggatgcccagttggttagccag
gcccgccaggtgctgcgcagcgagtcactcgccgccgtggtctatcgcgtcctgcgcgac
caggccagcagcctcccggtctatcgcctgagccagcatctgggtccccaggcgctcacg
ttcgaaggcgccgactatcctatccctggcttctatacccggcagggctatgcccagacc
ttttccacccagggcctggcagtgatccgcgacctagccgccgacaactgggtactgggc
gatggcgacggcatcaccggcatggacctgcgccacctgcaggtggaactcgaacagctc
tacttccgcgactacgccaatcagtggagcgaagcgctcgcccgggtcactctgcaaccg
gtaggcgatgccaaccagggtgccctgctcctagccggtctgacctcggccaactcacca
ctgctgcagcttctggtagaggtgcgcaacaacacccgtctggccgctcctgcccaggaa
gcagcagctcagggtgaagccctgccggacgccgcgcgccgcagtctgcagaatcgcttc
gagaacctgaaccggctgctcgatgaccagggcgcgccggtggctgacctggcgccggcc
atggccgcgctcaatgacctccagcagcaactggcggggctggcccatgccagcgtcccg
gaccaggtcgctttcgagctggccaagacgcgcatgacgggcaatcgcgatgcgctgaac
agtgtgcgcgccgcctccagtcgtctacccacaccggtcaacgactggcttggcctgctg
gtggacgacagctggcacctgatcctcgctggcgcctacgactacattaacgcccgctac
cagagtgagctgctggcaagctatcgcaacggcctggacaagcgttatccgttcaaggct
gatagcgagagcgacgtttccctcgccgacttccgcgagttcttcaaggcccagggcaca
gccgacacctttttcgacacctatctcaagcccttcgtgacccgcagcgaaagtgatgcc
tatcgcccgcgcagcatcgatggtcacagcctgccgctgtcacgtgactttctcgcccag
atgggtcgcacccagcagatccgccgcggcttctttgccgagaatccagccgagcccggc
atcgtcttcaagctcgaaccctattccctcgatccaaatctgacccgcgccgacctgaac
atcggtaaggaacgtctggaatatcgtcatggccccatcgtcgccaccacctttcgctgg
ccgcagaacgatgccctgaggaccaccctggtactggaagagctaggcggacggcgcgtc
ggccttgagcaggatggcagcgcctggtcgctgttccgtctgctggatcgcatgaagctg
caacagcacagcgcccgcgacgtgttgctggtgcaggcggatctggatggtcgccatgcc
ggttacctgctgtccagccagcgttcccccaaccccttcgacctggccaccctgcgcggc
ttcaggctgccggagcgcctctga

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