KEGG   Porphyrobacter sp. CACIAM 03H1: CBR61_00555
Entry
CBR61_00555       CDS       T09981                                 
Name
(GenBank) DNA ligase-associated DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
porc  Porphyrobacter sp. CACIAM 03H1
Brite
KEGG Orthology (KO) [BR:porc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:porc03400]
    CBR61_00555
Enzymes [BR:porc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CBR61_00555
    5.6.2.6  RNA 3'-5' helicase
     CBR61_00555
DNA repair and recombination proteins [BR:porc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CBR61_00555
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: ASJ92392
LinkDB
Position
complement(120488..122932)
AA seq 814 aa
MPLPPAIAAWFAGRGWRVRRHQREMLAKARAGRHALLVADTGAGKTLAGFLPTLCDFGGA
APPGDGLHTLYVSPLKALAQDVKRNLLTPIEEIGLPIRVETRSGDTPSDRKKRQRERPPH
ILLTTPESLSLLLSYPESADLFGGLKRVVIDEVHAFATDKRGDLLALSLARLHAIAPQAQ
RVALSATLANPRDFQEWLAPQTGEAGEIAAADLVIGEAGAEPEVEILLPQEERVPWGGHA
GRWAVPQLIEAIKANRTTLVFTNTRFLAEFIFQCLWEANDDNLPIGIHHGSLSTEARRKV
EEAMARGDLRALVCTASLDLGIDWGDIDLVVQMGAPKGSSRLLQRIGRAGHRLDVPSRAV
LVPGNRFEFLEAMAAKEAVDEGQRDGEAFRPGSLDVLAQHVMACACAGPFHEDALLAEVR
SALAYSWVDEVTFQRVLGFVSNGGYALRAYDRFQRIVRGKDGVWRLAHPNQAQRHRMNAG
IIVDSEMLTVRFRNGRSLGKVEERFAAQLSPGDTFFFAGMSLEVEGVKDMDVTVRAAKKS
ATIPSYGGLRLPLTTHLSTRVQALLSDRAGWGRFPDDVREWLEMQDYRSRLPAPGELLVE
SFPHGGKHYTAYYTFEGWNANQSLGMLITRRMEDRGLLPGGFVANDYCLAVWGLKPVTDP
APLLSPDILTGEFIQWVTESHLLRRAFREVAVISGLVERQHPGQRKTGKQVTFSTDLIYD
VLRKYEPDHVLIEAAWADARSRMTDVGRLADLLERSERELVHVTLDRVSPLAVPVMTMIG
REALPQGAVDDELLLEAEGLIAAAMRPDEPVEGD
NT seq 2445 nt   +upstreamnt  +downstreamnt
attcccctgccgcctgccatcgccgcgtggttcgcggggcgcggctggcgggtgcggcgg
caccagcgggagatgctggccaaggcgcgcgcgggccgccacgcgctgctggtggccgat
accggcgcgggcaagacgctcgccgggttcctgccgaccttgtgcgacttcgggggcgcc
gcgccgccgggggatgggctgcacacgctctacgtctcgccgctgaaggcgctggcgcag
gacgtgaagcggaaccttctgaccccgatcgaggagatcggcctgccgatccgggtggag
acccgcagcggcgacacgccctcggaccgcaagaagcgccagcgcgaacgccccccgcat
atcctgctgaccacgcccgagagcctctcgctgctgctctcctatcccgaaagcgccgat
ctgtttggcgggctgaagcgggtggtgatcgacgaggtccacgccttcgccaccgacaag
cgcggtgacctgctggcgctcagccttgcgcggctccacgccatcgccccgcaggcgcag
cgggtggcgctctctgcgaccctcgccaacccccgcgacttccaggaatggctcgcgccg
cagaccggcgaggcaggcgagatcgccgccgccgacctcgtcatcggcgaggcaggcgcg
gagcccgaggtcgagatcctcctgccgcaggaggagcgggtgccgtggggcgggcacgcg
gggcgctgggcggtgccgcagctgatcgaggcgatcaaggccaaccgcaccactctggtc
ttcaccaacacccgctttctcgccgagttcatcttccagtgcctgtgggaggcgaatgac
gacaatctccccatcggcatccaccacggctcgctctccaccgaggcaaggcgcaaggtc
gaggaggcgatggcgcgcggcgatctgagggcgctggtgtgcaccgcgagcctcgatctc
gggatcgactggggggacatcgacctcgtcgtgcagatgggcgcgcccaagggctcgtcg
cggctgctccagcggatcgggcgggccgggcaccgcctcgacgtgccgagccgcgcggtg
ctggtgccgggcaaccgcttcgagttcctcgaggcgatggccgcgaaggaggcggtcgac
gagggccagcgcgacggcgaggccttccgcccggggagcctcgacgtgctcgcccagcac
gtgatggcctgcgcctgtgcggggccgttccacgaggacgcgctgctggccgaggtgagg
agcgcgctggcctatagctgggtcgacgaggtgacgttccagcgggtgctcgggttcgtc
tccaacggcggctatgcgctgagggcctatgaccgcttccagcggatcgtgcggggcaag
gacggggtctggcggctcgcgcacccgaaccaggcgcagcggcaccggatgaacgccggg
atcatcgtcgattccgagatgctgaccgtgcgcttccgcaacggccgcagcctcggcaag
gtggaggagcggttcgccgcccagctctcgcccggagacaccttcttcttcgccggcatg
agcctggaagtcgagggcgtgaaggacatggacgttaccgtgcgggcggccaagaaaagc
gcgacaattccgtcgtatggcgggttgcgcctgcccctcaccacgcatctttccacgcgg
gtgcaggcgctgctgtcggaccgcgccggatgggggcgcttccccgacgatgtgcgcgag
tggctggaaatgcaggattaccgctcgcggcttccggcgcccggcgaactgctggtcgag
agcttcccccacggcggcaagcactacaccgcctattacaccttcgagggctggaacgcg
aaccagagcctcgggatgctgatcacccggcggatggaggaccggggtctgctgcccggc
gggttcgtggcgaacgactattgcctcgcggtgtgggggctgaagcccgtcaccgaccca
gcgcccctgctgtcgccggacatcctcaccggcgagttcatccagtgggtcaccgaaagc
cacctgctgcgccgcgccttccgcgaggtggcggtgatctcgggcctcgtcgagcgtcag
catccggggcagaggaagaccggcaagcaggtcaccttctcgaccgacctgatctacgac
gtgctcaggaaatacgagccggatcatgtgcttatcgaggccgcctgggccgatgcccgc
tcgcgcatgaccgatgtggggcggctcgccgatctgctcgagcgctccgagcgcgagctg
gtccatgtcaccctcgaccgcgtctcgccactggcggttccggtgatgacgatgatcggc
cgcgaggcgttgccgcagggggcggtggacgacgaactgctgctcgaggccgagggtctg
atcgccgccgcgatgcggccggacgagccggtcgagggggattga

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