Porphyrobacter sp. CACIAM 03H1: CBR61_01835
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Entry
CBR61_01835 CDS
T09981
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
porc
Porphyrobacter sp. CACIAM 03H1
Pathway
porc00061
Fatty acid biosynthesis
porc00071
Fatty acid degradation
porc01100
Metabolic pathways
porc01212
Fatty acid metabolism
porc02024
Quorum sensing
porc04146
Peroxisome
Module
porc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
porc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CBR61_01835
00071 Fatty acid degradation
CBR61_01835
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CBR61_01835
09145 Cellular community - prokaryotes
02024 Quorum sensing
CBR61_01835
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
porc01004
]
CBR61_01835
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
porc04147
]
CBR61_01835
Enzymes [BR:
porc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CBR61_01835
Lipid biosynthesis proteins [BR:
porc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CBR61_01835
Exosome [BR:
porc04147
]
Exosomal proteins
Exosomal proteins of breast milk
CBR61_01835
Exosomal proteins of breast cancer cells
CBR61_01835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Waikav_capsid_1
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ASJ89801
LinkDB
All DBs
Position
complement(377742..379418)
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AA seq
558 aa
AA seq
DB search
MTVSSIARPEAAYHHPVPLDSRFAPMSLPAMLERTLHQNPQAPFLHFLGRTYTYSHIHSQ
ARSFAAGLQALGIVKGDRVGLFLPNVPIYAAAYYGAMMAGAVVVNFSPLYSVEELSWQVA
DSGTKVLVTLDVPELYKTASKVLEASALETLVVGSLAEMLPWYKGLALKLLKRSQIAEVA
YGPAIRSWADMTPDRAPAPVDVTPADLALLQYTGGTTGRPKGAMLGHDQLSVNAQQVAAL
NPFGDPVGEVFMGALPFFHVFANTALLNHACVTGASIAMVPRFETKQVLETIERYRCTGF
PGVPTMFQAILDHPDLAKTDLSSLKVCISGGAPMPGPVHERFEAVTGVRVCEGYGLTESA
GVVSANPYEGTRKRGTIGQLVPGTEVILLDKEDPTKLAPQGEPGELAVHGPQVMRGYWNR
PETDAETFVTIEGKRYLRTGDVARVDAEGFLEIVDRIKDMIAVGGFKVFPSVVEDVILEH
PAVKEALVIGVPEEYRGEVPRAYVTLNEGATATGEELAGWLNSRIGKHERVDMVVVRESL
PKTMIGKLDRKTLRAEVL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcagtagcatcgcccgccccgaagccgcctatcaccacccggtcccgctcgac
agccggttcgcgccgatgagccttccggcgatgctcgagcgcacgcttcaccagaacccg
caggcgccgttcctgcacttcctggggcggacctacacctacagccacatccacagccag
gcgcgcagcttcgccgccgggcttcaggcgctcggcatcgtcaagggcgaccgggtcggc
ctgttcctccccaatgtgccgatctacgccgccgcctattacggggcgatgatggcgggg
gcggtggtggtgaacttctcgccgctctactcggtcgaggagctgagctggcaggtcgcc
gacagcggcacgaaggtgctggtgacgctcgacgtgccggagctctacaaaacggcgtcg
aaagtgctggaagcgtcggcgctggagacgctggtggtcggcagcctcgccgagatgctg
ccgtggtacaaggggctcgcgctcaagctcctgaagcgcagccagatcgccgaggtcgcc
tatggccccgcgatccgcagctgggccgacatgaccccggaccgcgcgcccgcgccggtc
gacgtcacgcccgccgatctcgccctgctgcaatataccggcggcaccaccgggcggccc
aagggggcgatgctggggcatgaccagctatcggtcaacgcccagcaggtcgccgcgctc
aatcccttcggcgatccggtgggcgaggtgttcatgggggcgctgcccttcttccacgtc
tttgccaacaccgcgctgctcaatcacgcctgcgtcaccggcgcctcgatcgcgatggtg
ccgcgcttcgagaccaagcaggtgctcgaaaccatcgagcggtaccgctgcaccggcttt
cccggcgtgccgacgatgttccaggcgatccttgaccatcccgacctcgccaagaccgac
ctctccagcctcaaggtctgcatctcgggcggggcgccgatgcccgggccggtccacgag
cggttcgaggcggtgacgggggtgcgggtgtgcgagggctacggcctcaccgaaagcgca
ggcgtggtctcggccaatccctatgagggtacccgcaagcgcggcacgatcggtcagctg
gtgcccggcaccgaggtgattctgctcgacaaggaggacccgacgaagctcgcgccgcag
ggcgagccgggggagctggcggtgcacggcccgcaggtgatgcgcggctactggaaccgg
cccgagaccgacgcggagaccttcgtcaccatcgagggcaagcgttacctgcgcaccggc
gacgtcgcgcgggtggacgccgagggctttctcgagatcgtcgaccgcatcaaggacatg
atcgcggtgggcgggttcaaggtcttcccgagcgtggtcgaggacgtgatcctcgaacat
cccgcggtcaaggaggcgctggtgatcggcgtgcccgaggaatatcgcggcgaggtgccg
cgcgcctatgtcaccctcaacgagggcgcgaccgccacgggcgaggagctggcgggttgg
ctcaattcccgcatcggcaagcacgagcgggtcgacatggtggtggtgcgcgagagcctg
cccaagacgatgatcggcaagctcgaccgcaagaccctcagggccgaggtgctctga
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