Porphyrobacter sp. CACIAM 03H1: CBR61_02075
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Entry
CBR61_02075 CDS
T09981
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
porc
Porphyrobacter sp. CACIAM 03H1
Pathway
porc03030
DNA replication
porc03430
Mismatch repair
porc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
porc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBR61_02075 (dnaQ)
03430 Mismatch repair
CBR61_02075 (dnaQ)
03440 Homologous recombination
CBR61_02075 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
porc03032
]
CBR61_02075 (dnaQ)
03400 DNA repair and recombination proteins [BR:
porc03400
]
CBR61_02075 (dnaQ)
Enzymes [BR:
porc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBR61_02075 (dnaQ)
DNA replication proteins [BR:
porc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CBR61_02075 (dnaQ)
DNA repair and recombination proteins [BR:
porc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CBR61_02075 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ASJ89842
LinkDB
All DBs
Position
423468..424172
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AA seq
234 aa
AA seq
DB search
MREVIFDTETTGLDPKTGDRMVEIGCIEMIDRVETGRTFHAYFNPDRDMPVEAERVHGLS
AAFLATKPRFAELADELLEFLGDAPLVAHNAGFDFGFLNNELELAGRAAISMERMVDTVA
IARRKHPGAKLSLDALCTRYGIDRSHRVKHGALLDAELLAQVYVELTGGRQIGLGLAPGD
AVPTLVATSVTNVPWHRPSADRPRREPRPHVASPEELERHRAFIAGITDAIWAS
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaggtcatcttcgacaccgaaaccaccgggctcgaccccaagaccggggaccgc
atggtggaaatcggctgcatcgagatgatcgaccgggtcgagaccggccgcaccttccac
gcctatttcaaccccgatcgcgatatgccggtggaggccgagcgggtccacggcctcagc
gccgccttcctcgccaccaagccgcgcttcgcagaactggcggacgaactgctcgaattc
ctcggcgatgccccgctggtggcgcacaatgccgggttcgacttcggcttcctcaacaac
gaactggaactggcgggccgcgcggcgatcagcatggagcggatggtcgacaccgttgcc
attgcgcgcaggaagcaccccggcgccaagctcagcctcgatgcgctgtgcacccgctac
gggatcgaccgctcgcatcgggtcaagcacggcgcgctgctcgatgccgaactcctcgcg
caggtctatgtcgagctgaccggcgggcggcagatcggcctcggccttgcccccggggac
gccgtccctacccttgtcgcgacaagcgtcaccaacgtgccctggcaccgtccgtccgcg
gaccggccccggcgcgaaccccgcccccatgttgccagcccggaggagctggaacgacac
cgcgcattcattgccgggatcacggatgcgatctgggccagttga
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