Porphyrobacter sp. CACIAM 03H1: CBR61_02870
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Entry
CBR61_02870 CDS
T09981
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
porc
Porphyrobacter sp. CACIAM 03H1
Pathway
porc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
porc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CBR61_02870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porc03400
]
CBR61_02870
Enzymes [BR:
porc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CBR61_02870
DNA repair and recombination proteins [BR:
porc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CBR61_02870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gly_transporter
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ASJ89982
LinkDB
All DBs
Position
complement(584968..586410)
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AA seq
480 aa
AA seq
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MSDLIANPKPGDNAQPLTISEISALLKRTVEDRFGFVRLRGELSGVKRAASGHFYCCLKD
EGAVIDGVMWKGNAARLNFRAEDGLEVIATGKLTTYPGRSKYQIVIDSLELAGEGALLAL
LEKTRTRLAAEGLFAAERKRALPFLPQVIGVVTSPTGAVIRDILHRLADRFPSHVLVWPV
LVQGQGAAEQVAAAVRGFSALQPGGPVPQPDVVIVARGGGSIEDLWSFNEEAVVRAIAEC
TIPVISAVGHETDTTLADFAADRRAPTPTAAAEMAVPVRADLAFTLADLAQRQRRAVYRP
VELGRERLAARVRLLPRPENLLAPQAQRLDDLSERLRRALGDRSAKGRERLAGVAARLSP
SLLLRSAAEAQRRLDRARLSPVLVERPLREGAHRLAALTRVMSQLHPEKPLERGYAIIRG
AGGRALTTRTEAAGEARLLLQWRDGTLAAVPEGAAPPPPAPPPRKPAKSAPPPAQDDLFG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacctgatcgccaatcccaagcccggggacaacgcccagccgctcacgatcagc
gagatatccgcgctgctcaagcgcacggtcgaggaccgcttcggcttcgtgcggctgcgc
ggcgaactttcgggggtgaagcgcgccgcctcggggcacttctactgctgcctcaaggac
gagggcgcggtgatcgacggggtgatgtggaagggcaacgccgcccgcctcaatttccgc
gccgaggatggcctcgaggtgatcgccaccggcaagctcaccacctaccccgggcggtcg
aaataccagatcgtgatcgacagtctcgaactggccggagagggcgcgctgctggcgctg
ctcgaaaagacccggacgcggctcgccgccgaggggctgttcgcggcggagcgcaagcgg
gcgctgcccttcctgccgcaggtgatcggcgtcgtcacgtcgccgacgggggcggtgatc
cgcgacatcctccatcgcctcgccgaccgcttccccagccacgtgctcgtctggccggtg
ttggtgcaggggcagggcgcggccgagcaggtcgcagcggcggtgcgcgggttctccgcg
ctccagcctggcggcccggttccgcaacccgacgtggtgatcgtcgcgcgcgggggcggc
tcgatcgaggacctgtggagcttcaacgaggaagcggtggtgcgcgccatcgccgaatgc
accatccccgtgatcagcgccgtggggcacgagaccgacaccacgctcgcggatttcgcc
gccgaccggcgcgcgcccacccccaccgctgccgccgagatggccgtgccggtgcgcgcc
gacctcgccttcaccctcgccgaccttgcccagcgccagcgccgcgcggtctatcgcccg
gtcgagctggggcgtgagaggctcgccgcccgtgtgcggctgctgccccggcccgagaac
ctgctcgcaccccaggcccagcggctcgacgatttgtcggagcgcctgcgccgcgcgctc
ggcgaccgttcggccaaggggcgcgaacggctcgccggggtcgccgcgcgcctttcgccg
agcctgctcttgcgcagcgccgccgaggcgcagcggcggctcgaccgtgcgcgcctctcg
cccgtcctcgtcgaacgccccctgcgcgagggcgcgcaccgcctcgccgcgctcacccgg
gtgatgagccagctccatcccgaaaagccgctggagcgcggctatgccatcatccgcggc
gccgggggccgggcgctcaccacccgcaccgaggccgcaggcgaggcgcgcctgctcctg
caatggcgcgacgggacgctcgccgccgtgcccgagggcgcagccccgcccccgcctgcg
cctccgccccgcaagcccgcgaaatcggcgccgccgcccgcccaagatgatttgttcggc
tag
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