KEGG   Porphyrobacter sp. CACIAM 03H1: CBR61_03645
Entry
CBR61_03645       CDS       T09981                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K02405  RNA polymerase sigma factor FliA
Organism
porc  Porphyrobacter sp. CACIAM 03H1
Pathway
porc02020  Two-component system
porc02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:porc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CBR61_03645
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CBR61_03645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:porc03021]
    CBR61_03645
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:porc02035]
    CBR61_03645
Transcription machinery [BR:porc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CBR61_03645
Bacterial motility proteins [BR:porc02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    CBR61_03645
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 Rv2175c_wHTH HTH_5 PhyR_sigma-like
Other DBs
NCBI-ProteinID: ASJ90114
LinkDB
Position
complement(750687..751412)
AA seq 241 aa
MKHDHTAFGALVQPYAPSRAEVEDRVRRFLPLVRRTAWHINGRGREGLEIEDLVQAGILA
LTECAQRHAGPTEDGFAAYAKIRVRGAMLDEVRRTAHDSRTARAKRSAYERALASLRGSL
GREPSRGELAERMEVSDAELLAIEASGVKLTPIEDAYDESNLAFASDDPDPFEALCAVED
RERLIAAMVKLPDRLKLVLQLFFVEELNLTEIAAVLEVSVPRVHQLRAKALKDLRTLLEA
A
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaagcacgaccacaccgccttcggggctcttgtccagccctatgccccctcccgtgcc
gaggtcgaggaccgggtgcgccgcttcctgccgctggtgcgccgcaccgcatggcacatc
aacgggcgcgggcgcgagggactggaaatcgaggatctggtgcaggccggcatcctcgcg
ctcaccgaatgcgcccagcgccacgcggggccgaccgaggacggctttgccgcctatgcc
aagatccgggtgcgcggcgcgatgctggacgaggtgcgccgcaccgcccacgacagccgc
accgcgcgggcaaagagatcggcctacgagcgggcgctcgcttcgcttcgcgggtcattg
ggccgcgagccgagccgtggggaactggcagaacggatggaggtctccgacgccgaactg
ctcgccatcgaggcctcgggcgtcaagctcaccccgatcgaggacgcctatgacgaaagc
aacctcgccttcgccagcgacgatcccgatcccttcgaggccctgtgcgcggtggaagat
cgcgagcggctgatcgcggcgatggtgaagctcccggaccggctgaagctggtgctccag
ctgttcttcgtcgaggagctcaacctcaccgaaatcgccgccgtgctggaggtcagcgtg
ccgcgcgtccaccagctcagggccaaggcgctgaaggacctgcgcacgctgctcgaggcc
gcctga

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