Porphyrobacter sp. CACIAM 03H1: CBR61_04425
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Entry
CBR61_04425 CDS
T09981
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
porc
Porphyrobacter sp. CACIAM 03H1
Brite
KEGG Orthology (KO) [BR:
porc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
porc01002
]
CBR61_04425
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
porc01011
]
CBR61_04425
Peptidases and inhibitors [BR:
porc01002
]
Cysteine peptidases
Family C82
CBR61_04425
Peptidoglycan biosynthesis and degradation proteins [BR:
porc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CBR61_04425
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Motif
Other DBs
NCBI-ProteinID:
ASJ92473
UniProt:
A0A2Z2PEU9
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All DBs
Position
911266..912639
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AA seq
457 aa
AA seq
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MAQEGGALKGPGVIPGGQQTGGPVTVQIPAPAPTPSPTPKSSDAFTQAFPTVSEPVVQGG
DKPVVPLVQNWTVANAAKLVAVIEGIGAEGLDPKDYDLAPLKVALASGPSKELNELASQS
FIWLVEDLRDGRTPMEAREQWFVVDPDRDAHPSGEVLAEALRTGDIAGTLAKLNPTHPDY
AKLKAELAATPASNAAKRKLIRANMDRWRWLARDLGSQYLITNVPEFQLRLTVKNRIIST
YRTIVGKPGRTATPQLAEMVEGVVFNPTWTVPQSIVKGEGLGARALANPAWAKRNGYVAT
KGANGYITVVQQPGPGNSLGQMKLEMPNPHAIFFHDTPSRHLFANADRALSHGCVRTERA
LELAMTMAILGKGATKEEAVAISTSGKYTKVMLEKQWAAYITYFTMATDINGEMATFKDI
YGRDAPVLASLDKPRVRNRSILPTDEVIVIEDDLRDS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggagggcggggcgctcaagggacccggcgtgatccccggcggccagcagacc
ggcggcccggtgaccgtgcagatccccgcgcccgcgcccaccccctcgccgacgcccaag
agctcggatgccttcacccaagccttcccgaccgtctcggagccggtggtgcagggcggc
gacaagcccgtggtcccgctggtgcagaactggaccgtggccaatgccgccaagctcgtc
gcggtgatcgaggggatcggcgccgaggggctggaccccaaggactacgacctcgccccg
ctcaaggtcgcgctcgcctccggcccttcgaaggagctgaacgagctcgcctcgcagagc
ttcatctggctggtcgaggacctgcgcgacgggcgcaccccgatggaggcgcgcgagcag
tggttcgtggtcgatcccgaccgtgatgcccacccctcgggcgaggtgctggccgaggcg
ctgcggaccggcgacatcgccggcaccctcgcgaagctgaaccccacccaccccgattac
gccaagctcaaggcggagctggcagcgacccctgccagcaatgccgccaagcgcaagctg
atccgcgccaacatggaccgctggcgctggctggcgcgcgatctcggctcgcaatacctc
atcaccaacgtgcccgagttccagctgcgcctgacggtcaagaaccgcatcatcagcacc
taccgcacgatcgtcggcaagccggggcgcaccgccaccccgcagctcgccgagatggtc
gagggtgtggtcttcaatcccacctggacggtgccgcagtcgatcgtcaagggcgagggg
ctgggcgcacgggcgctcgccaaccctgcctgggccaagcgcaacggctacgtcgcgacc
aagggcgccaacggctacatcaccgtggtccagcagcccgggccgggcaattcgctcggg
cagatgaagctcgaaatgcccaacccgcacgcgatcttcttccacgacacgccctcgcgc
cacctcttcgccaatgccgaccgggcactcagccacggctgcgtgcggaccgagcgggcg
ctggagctggcgatgacgatggcgatcctcggcaagggcgcgaccaaggaggaagcggtc
gcgatctcgacctcgggcaagtacaccaaggtgatgctcgagaagcagtgggccgcctac
atcacctatttcaccatggcgaccgacatcaacggcgagatggcgaccttcaaggacatc
tatggccgcgacgcgccggtgctcgccagcctcgacaagccgcgggtgcgcaaccgcagc
atcctgccgacggacgaggtgatcgtgatcgaggacgatctgcgcgacagctag
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