Porphyrobacter sp. CACIAM 03H1: CBR61_04860
Help
Entry
CBR61_04860 CDS
T09981
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
porc
Porphyrobacter sp. CACIAM 03H1
Brite
KEGG Orthology (KO) [BR:
porc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
porc02000
]
CBR61_04860
Transporters [BR:
porc02000
]
Other transporters
Pores ion channels [TC:
1
]
CBR61_04860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
MtrB_PioB
Motif
Other DBs
NCBI-ProteinID:
ASJ90319
LinkDB
All DBs
Position
complement(992676..995417)
Genome browser
AA seq
913 aa
AA seq
DB search
MRNIHKALLSGSTIALGAALTGAAPAAAAEAADSEAPVVVTTAAQAAAQAGEAADDVVDS
GDVLIVTGTRRSNRTVSESPVPIDVIGGEQLRQSGLVETARLLRDLVPSLNFPQPSITDG
TDAIRPATLRGLGPDQTLVLINGKRRHVAALLNLNGSVGRGSTAVDLNQIPSSAIGRVEV
LRDGAAAQYGSDAIAGVINFQLNDAREGGRFFVNYGGFNTRIAGVQEVTGVNGTAGAVPT
LTPDGVLQLNTNGRDLKVTDGEVLTVSGNIGLPLGPEGFLNITAEYRDRNDTNRTGYDPR
RNYAQSGPLDPRELTLDRRYHRYGDPATEDLNIVVNMGIPLDENVEFYAFGSYGTRDAES
AGFYRRAADNRNVLAIYPDGFLPLINTDTTDFAIVGGLEGDFSGWMWDLSMSYGENRTEF
RVTNSVNASLGAASQTEFDAGTIDYSQLMANLGVSREIEIAGIEQMTLSFGAEWRREEYQ
LGAGELNSYVAGPVRVGANNSFITGAAATAFAAPGAQVFPGFQPRIGGVDVTLPNSRENV
SLYAELDTDISEGFNIQVAGRFEDYTDFGSTLNGKLASRLALFDGFALRGAVSTGFRAPS
LQQQFFAAAATNNIGGVLVDAVTLPVNNPVAIALGATPLEAEKSFSWSAGAVFDRVDGLN
VTFDYYQIDIDDRIVLTDNLTANRDAAGNPTGTNPGRGIAQILNAAGFTSISAARFFFNG
IDTRTRGFDAIATYRTGLGDLGTLSLTAGYNWNDVDITDRRTNPGSLAQVPGIDLFGRLE
SLRIERGQPRDRINLGADWEWNWLSATLRTNRFGEVFSAGATPINDVLLEPRWITDLELR
LRPQGFAEGLELAVGANNLFDQYPTVNPTGRATDPVTGQPGNLSVNNYFLPFSSFSPFGF
NGRFLYGRISFAF
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaatatccataaggcgcttctctccggttcgaccatcgccctcggtgcggccctg
accggcgccgcaccggccgccgctgccgaagccgcggattccgaggctccggtcgttgtc
accaccgccgcccaggccgcggctcaggcaggtgaggcagcggacgacgtcgtcgacagc
ggcgacgtgctgatcgtcacgggcacgcggcgttcgaaccgcacggtttccgaaagcccg
gttccgatcgacgtgatcggcggcgaacagctgcgccagtcgggcctcgtcgagaccgcg
cgcctgctgcgcgacctggtgccctcgctcaacttcccgcagccctcgatcaccgacggc
accgacgcgatccgccccgccaccctgcgcggcctcggacccgaccagacgctggtgctg
atcaacggcaagcgccgccatgtcgccgcgctgctcaacctcaacggctcggtcggacgc
ggctcgacggcggtcgacctcaaccagatcccctcatccgcgatcggccgggtcgaggtg
ctgcgcgatggcgccgcggcacaatacggctcggacgcgatcgccggggtgatcaacttc
cagctcaacgatgcgcgtgaaggcgggcggttcttcgtcaactacggcggcttcaacacc
cgcatcgccggcgttcaggaagtgaccggcgtgaacggcaccgcgggcgccgtgccgacg
ctcacccccgacggggtgctgcagctcaacaccaacgggcgcgacctcaaggtgaccgac
ggcgaggtgctgaccgtttcgggcaatatcggcctgccgctggggcccgagggcttcctc
aacatcaccgccgagtaccgcgatcgcaacgacaccaaccggaccggctacgacccgcga
cgcaactacgcccagagcggcccgctcgatccgcgcgagctcacgctcgaccggcgctac
caccgctacggcgacccggcgaccgaggacctcaacatcgtggtcaacatgggcatcccg
ctcgacgagaatgtcgagttctacgccttcggcagctacggcacgcgcgatgcggaatcc
gccggcttctatcgccgcgcggccgacaaccgcaacgtgctggcgatctatcccgacggc
ttcctgccgctgatcaacaccgacaccaccgacttcgccatcgtcggcggcctcgagggt
gatttcagcggctggatgtgggacctgtcgatgtcctacggcgagaaccggaccgaattc
cgcgtcacaaactcggtcaacgcctcgctgggcgcggcgagccagaccgagttcgacgcg
ggcacgatcgattacagccagctgatggccaacctcggcgtcagccgcgagatcgagatc
gccgggatcgagcagatgaccctgtccttcggcgcggagtggcggcgcgaggaataccag
ctgggtgcaggcgagctgaacagctatgtcgccgggcccgtgcgggtcggggcgaacaac
agcttcatcaccggcgccgcggcgaccgccttcgccgcacccggcgcgcaggtcttcccg
ggcttccagccgcgcatcggcggggtcgacgtgacgctccccaactcgcgcgagaacgtc
tcgctctacgccgaactcgacaccgacatctcggaaggcttcaacatccaggtcgcgggc
cggttcgaggattacaccgacttcggctcgaccctcaacggcaagctggcgagccgcctt
gcgctgttcgacggcttcgccctgcgcggggcggtgtcgaccggcttccgcgcgccctcg
ctccagcagcagttcttcgcggccgccgccaccaacaacatcggcggcgtgctggtcgat
gcggtgaccctgccggtcaacaacccggtcgcgatcgcgctgggcgcgaccccgctcgag
gccgagaagtctttctcgtggtcggcgggcgcggtgttcgaccgggtcgacgggctcaac
gtgaccttcgactactaccagatcgatatcgacgaccgcatcgtgctgaccgacaacctg
acggccaaccgcgatgccgcgggcaatccgaccggcaccaacccgggccgcgggatcgcg
cagatcctcaacgccgcgggcttcaccagcatctcggcggcgcggttcttcttcaacggg
atcgacacccgcacccgcggcttcgatgccatcgcgacctatcgcaccgggctgggcgac
ctgggcacgctgtcgctcacggcgggctacaactggaacgatgtcgacatcaccgatcgc
cgcaccaaccccggaagcctcgcgcaggtgcccggcatcgacctgttcggacggctcgaa
tccctgcgcatcgagcgtggccagccgcgcgaccgcatcaacctgggcgccgactgggag
tggaactggctgagcgccaccctgcgcaccaaccgcttcggcgaggtcttctcggccggt
gcgacgccgatcaacgacgtgctgctcgagccgcgctggatcaccgacctcgaactgcgc
ctgcgcccgcagggctttgccgaggggctggaactggcggtcggggcgaacaacctgttc
gaccaatacccgaccgtgaacccgaccggacgggccaccgatccggtcaccggccagccg
ggcaacctgtcggtcaacaactacttcctgccgttctcgtccttctcgcctttcggcttc
aacggacggttcctctacggccggatcagcttcgccttctga
DBGET
integrated database retrieval system
