Porphyrobacter sp. CACIAM 03H1: CBR61_06405
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Entry
CBR61_06405 CDS
T09981
Name
(GenBank) autotransporter domain-containing protein
Organism
porc
Porphyrobacter sp. CACIAM 03H1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Trypsin
GBD_Hemicentin
Motif
Other DBs
NCBI-ProteinID:
ASJ90590
LinkDB
All DBs
Position
complement(1364460..1368101)
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AA seq
1213 aa
AA seq
DB search
MIKGDRRVRPALMTGVALAGLVLGAGAANAQSVLGVNGPRLDAAELEDARHRDVMLDPRE
VLNERHGGTILDPTQLLDERHVRAPALGTEIETYVGQVDIQDESQIVISLPGTPTTARDP
VNINGIGQMIVSTPGAGGGVSLGLCTGTLINPRTVLFAAHCVNNRPATAYGSASGGVAIG
FGFNNSNNTTQPGQPAGTSPLLNWLFGSAAQGRAPNTTSTSEFFYTVNGLVYNPLSLEPA
AAGFLYGDVAIASLDTPARNIPTWAILLSALTPPSQITAANGTGYHVTISGYGANGIGTT
GATGAIDYRRRVAENWLGALTSLNVRDTFLFGGFSVSRPQNLYWIDFDDPRRGTPQASPF
DFNVFRDNALPNEGTTSGGNSGGPLILDRTFAQQVVIGVLSGGSRFFGAQPGSSYGTASF
YQPIYLYWDWIAANNPYRYVGAVAGSGNWEDPTRWVSLQDPNYFIIGANGQLVNGVPTRP
GEQNLGTSGQFGDLCVQGPAAGGGDACLNLATGQIRPTPGGIGTSGNDTLGEGAGIGSAL
SNNFGSDVINPDGAFAANGGLTASDEPQNTAVLPPATIANGLPGATNFVPNNTPGNRLAG
VLPRYFDVTLANTGTTTLSSTVTIDRLTLRGPAGLTINSGARLNSLIDITQAGGIMTVNG
TLTSVGDYTVMGGLLQGSGTITAPFVNSVAGQIAPGTIGTTGTLSIGGNLVLASGNQYLV
DISGTASDRIAVTGAANVGGQVVVGAGVTGQVNGLGRQFTILTATGGVTGTFSAQSLSPI
LSQQFTYQTNAVLMQIRAASYNSVIDRNSTVQTAYAQLFDQNRPNEALASLYALDFASVD
TIRNTFASLAPVNEQAVRSLSAQSVNMLQNFNAARLREADKSRAGGKVAVIGRPLELAQM
GMAPALQPLGGIQMGVQDGETTMTETNLPDNVAIFAAGGLVFGDADSLPGYGVGNTIAGR
LISQPTEFDGFYLAGGIEFYPGESTMVGISGFYSSIDANTPLDQRVQNDTYAASVYLRHA
FANGPVIDGQFSMGSMGFDTRRQVQFLTAPQTLESTSDDLLVSGALGISYDLESSIGTIS
PGIEARYASVDLATTRETGGTLGLNFARESFESKQARFGFAYEKQGKQIAINANAQFVWE
FEDGPQLLGANFATGTGPNANFVLDTADHTWGEVGIAATFGTGPLQTAISVDTTIGRDNA
EAQVVRGSATWRF
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaggtgatcgtcgggtgcgcccggcgctgatgacgggtgtggcgctggccggc
ctggtgctcggtgccggagccgccaatgcgcaatccgttctgggcgtgaacggcccgcgg
ctcgacgccgccgagctcgaggatgcgcggcatcgcgacgtcatgctcgatccgcgcgag
gtgctgaacgagcgccacggcggcacgatcctcgatccgacccagctcctcgacgaacgc
cacgtgcgcgctcccgcgctcggcaccgagatcgagacctatgtcggccaggtcgacatc
caggatgaatcccagatcgtgatttcgctgccgggcaccccgaccacggcacgcgatccg
gtcaacatcaacggcatcggccagatgatcgtcagcaccccgggtgccggcggcggcgtg
agcctcgggctgtgcaccggcaccctgatcaacccgcgcaccgttctgttcgccgcgcac
tgcgtgaacaaccgccccgcgaccgcctacggttcggcctcgggcggggtcgcgatcggc
ttcggcttcaacaattccaacaacaccacccagccgggtcagccggccggcacctccccg
ctgctcaactggctgttcggttcggcggcgcagggccgcgcgcccaacaccaccagcacc
agcgagttcttctacaccgtcaacgggctggtctataacccgctctcgctcgaaccggcg
gctgcgggcttcctctatggcgacgtggcgatcgcctcgctcgacacgcccgcgcgcaac
atcccgacctgggcgatcctgctgtcggcgctgaccccgccctcgcagatcaccgcggcc
aacggcacgggctaccacgtcaccatcagcggctacggcgccaacggcatcggcaccacc
ggcgcgaccggcgcgatcgactatcgccggcgcgtggccgagaactggctcggtgcgctg
acctcgctcaacgtgcgcgacaccttcctgttcggtggcttctcggtcagccggccgcag
aacctctactggatcgacttcgacgatccgcgccgcggcaccccgcaggcgtccccgttc
gacttcaacgtgttccgcgacaacgccctgcccaacgaaggcaccacctcgggcggcaac
tcgggcggcccgctgatcctcgaccggaccttcgcccagcaggtcgtgatcggcgtcctt
tcgggcgggtcgcgcttcttcggcgcgcagccgggttcgagctacggcacggcctcgttc
taccagccgatctacctctactgggactggatcgcggcgaacaacccctaccgctacgtc
ggcgcggtcgccggcagcggcaactgggaagacccgacccgctgggtctcgctgcaggac
cccaactacttcatcatcggcgccaacggccagctggtgaacggcgttccgacccgcccc
ggcgagcagaaccttggcacctcgggccagttcggtgacctctgcgtgcagggcccggcg
gcgggcggcggcgatgcgtgcctcaacctcgcgaccggccagatccgtccgaccccgggt
ggcatcggcacctcgggcaacgacacactcggcgaaggggcggggatcggcagcgcgctg
tcgaacaactttggctccgacgtcatcaaccccgacggcgcctttgccgcgaacggtggc
ctcaccgcctccgatgagccgcagaacacggcggtcctgcccccggcgaccatcgccaac
ggcctgccgggcgcgaccaacttcgtgcccaacaacaccccgggcaaccgccttgcgggc
gtgctgccgcgctacttcgacgtgacgctggccaacaccggcaccaccacgctgagcagc
acggtgaccatcgaccggctgaccctgcgcggtccggccgggctgacgatcaactcgggc
gcccgcctcaactcgctgatcgacatcacccaggccggcgggatcatgaccgtgaacggc
acgctgacctcggtgggcgactacaccgtgatgggcggcctgctgcagggttcgggcacg
atcactgcgcccttcgtgaacagcgtggccggccagatcgcgccgggcacgatcggcacc
accgggacgctgtcgatcggcggcaacctcgtgctcgcctcgggcaaccagtacctcgtc
gacatctcgggcaccgcatccgaccggatcgccgtgacgggcgcggccaatgtcggcggc
caggtggtggtcggcgcgggcgtgaccgggcaggtcaacggcctcggccgccagttcacc
atcctcaccgccaccggcggggtgaccggcactttctctgcccagagcctctcgccgatc
ctcagccagcagttcacctaccagacgaacgcggtgctgatgcagatccgcgcggcgagc
tacaactcggtgatcgaccgcaacagcacggtccagaccgcctacgcccagctgttcgac
cagaaccgccccaacgaggcgctggcgagcctctatgcgctcgacttcgcgtcggtcgac
acgatccgcaacaccttcgcgagcctcgcacctgtcaacgagcaggcggtgcgttcgctg
tcggcgcagtcggtcaacatgctccagaacttcaacgccgcgcgcctgcgcgaggcggac
aagtcgcgggcgggcggcaaggtcgcggtgatcgggcgtccgctcgagctggcgcagatg
ggcatggcccccgcgctccagccgctcggcgggatccagatgggcgtgcaggacggcgag
accacgatgaccgagacgaacctgcccgacaatgtcgcgatcttcgcggcgggcggtctg
gtgttcggcgacgcggattcgctccccggctacggggtgggcaacacgatcgcgggccgg
ctgatctcgcagcccaccgagttcgacgggttttacctggcgggcgggatcgagttctac
ccgggcgagagcaccatggtcgggatctcgggcttctacagctcgatcgacgccaacacg
ccgctcgaccagcgggtccagaacgacacctatgccgcgtcggtctacctgcgtcacgcc
ttcgcgaacggccccgtgatcgacggccagttcagcatgggcagcatgggcttcgacact
cggcgtcaggtgcagttcctcaccgccccgcagacgctcgaatcgacctcggacgacctg
ctggtctcgggtgccctcggcatctcttatgacctcgaaagcagcatcggcacgatctcg
ccgggtatcgaggcgcgctacgccagcgtcgatctcgccaccacgcgcgagaccggcggc
acgctcggcctgaactttgcccgcgagagcttcgagagcaagcaggcccgcttcggcttc
gcctacgagaagcagggcaagcagattgcgatcaacgccaacgcgcagttcgtgtgggag
ttcgaggacggtccgcagctgctcggcgcgaacttcgcgaccggcaccggcccgaacgcg
aacttcgtgctcgacacggccgaccacacctggggcgaggtcggcatcgcggcgaccttc
ggcaccggaccgcttcagacggcgatctcggtggacaccaccatcggccgcgacaatgcc
gaggctcaggtggtgcgcggcagcgcgacctggcgcttctga
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