Porphyrobacter sp. CACIAM 03H1: CBR61_10825
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Entry
CBR61_10825 CDS
T09981
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
porc
Porphyrobacter sp. CACIAM 03H1
Brite
KEGG Orthology (KO) [BR:
porc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
porc03032
]
CBR61_10825
03400 DNA repair and recombination proteins [BR:
porc03400
]
CBR61_10825
Enzymes [BR:
porc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CBR61_10825
DNA replication proteins [BR:
porc03032
]
Prokaryotic type
DNA Topoisomerases
CBR61_10825
DNA repair and recombination proteins [BR:
porc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CBR61_10825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
ASJ91360
LinkDB
All DBs
Position
2260132..2262921
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AA seq
929 aa
AA seq
DB search
MSDDSDILDSTPPAPMGGFDRIDIVDEMKSSYLDYAMSVIVSRALPDVRDGLKPVHRRIL
FASQEGGFVAGRPYRKSAKIVGDVMGNYHPHGDAAIYDALARMTQPWSMRVPLIDGQGNF
GSMDPDPPASMRYTEARLARVANSLLDDLDKDTVDFTDNYDGSRKEPAVLPARFPNLLVN
GAGGIAVGMATNVPPHNLGEVIDGCLAFIENPHITSEELIRYIPGPDFPTAPLILGTHGA
RMAYTTGRGSILMRCRHEIERGRNERQSIVFTSIPYQVGKSNLVEKIAEAAKDKRIEGIA
DIRDESSREGVRVVVDLKRDATPEVVLNQIWRHTPAQSSFPANMLAIRGGRPETLTLRDI
VQSFIAFREEVITRRTKFELNKARERAHLLLGLVVAVSNLDEVVAMIRSARNPAEARARL
LAKEWPIGDIAQYIRLVEAIEPNADESGGTYRLSERQVKAILELRLHRLTALGRDEIGDE
LKGLAAAIEEYLSILADRVKLYEVMRGELEEIKATYATPRLSEIAPAWDGLDDEDLIERE
EMVVTVTHGGYIKRTPLDTFRAQGRGGKGRSGMATKDEDAVVELFVTSTHNPVLFFTNTG
RVYRMKVWKLPEGGPQTKGRPMVNLLPLGEDERVTNVLPLPEDEASWADLNIVFATEQGM
VRRNSMDAFANIPTAGKYAMGFVEGSGDRLIGVQLLTEDQQIFLASDSGKAIRFSATDAR
ETKSRTGIGVRGMSLKKGGKVVSMAVLAPLTADMETREAYVRAAAWKNNGAVPTLPADQV
AAMAEAEEFILTITANGYGKISSAYEYRTTSRGGQGITNIGAPESNPERNGPVVASFPVK
HGSQLMLVTDQAKLIRLGIDFRHLIEGGFESLKGFSISGRGSSGIRIFDVAKGEHIVGAA
LIDETEEPENPAEEAIAAELAGKTEPPVT
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacgacagcgacatcctcgattccaccccgcccgcacccatgggcggcttcgac
cgcatcgacatcgtcgacgagatgaagtcgagctatcttgactatgcgatgagcgtcatc
gtcagccgcgcgctgcccgacgtgcgcgacgggttgaagccggtgcaccgccgcatcctc
ttcgccagccaggaaggcggcttcgtcgccgggcggccctatcgcaagagcgccaagatc
gttggcgacgtgatgggcaactaccacccgcacggcgacgcggcgatctacgatgccctc
gcccgcatgacccagccctggtcgatgcgcgtgccgctgatcgacggtcagggcaatttc
ggctcgatggaccccgatccgccggcctcgatgcgctacaccgaggcgcggctggcgcgg
gtcgcgaactcgctgctcgacgatctcgacaaggacacggtcgacttcaccgacaactac
gacggcagccgcaaggaaccggccgtcctgcccgcacgcttccccaacctgctggtcaac
ggcgcgggcgggatcgcagtcggcatggcgaccaacgtgccgccgcataacctcggcgaa
gtgatcgacggctgccttgccttcatcgagaacccgcacatcacctcggaagagctgatc
cgctacatccccggccccgacttcccgaccgcgccgctgatcctcggcactcacggggcg
cggatggcctacaccacgggccgcgggtcgatcctgatgcgctgccgccacgagatcgag
cgcggccgcaacgagcgccagtcgattgttttcacctcgatcccctaccaagtcggcaag
tcgaacctcgtcgagaagatcgccgaggccgcgaaggacaagcgcatcgagggcatcgcc
gacatccgcgacgaaagctcgcgcgagggtgtgcgcgtggtggtggacctgaagcgcgac
gccacgccggaagtcgtgttgaaccagatctggcggcacacgcctgcccagtcgagcttc
cccgccaacatgctggcgatccgcggcggccgccccgaaacgctcaccctgcgcgacatc
gtgcagagcttcatcgccttccgcgaggaggtcatcacccgccgcaccaagttcgaattg
aacaaggcgcgcgagcgggcgcacctgttgctcggcctcgtggtcgcggtctcgaacctc
gacgaggtggtggcgatgatccgctccgcccgcaatccggccgaggcccgcgcgcggctg
ctcgccaaggaatggccgatcggcgacatcgcacagtatatccgcctggtcgaggcgatc
gagcctaacgcggacgagagcggcggcacctatcgcctgtccgaacggcaggtgaaggcg
atcctcgaactgcgcctccaccgcctcaccgcgctcggccgtgacgagatcggcgacgag
ttgaagggccttgccgccgcgatcgaggaatatctctcgatcctcgccgaccgggtgaag
ctctacgaggtgatgcgcggcgaactcgaggagatcaaggcgacctacgccaccccgcgc
ctgtccgagatcgcgcccgcatgggacggtctcgacgacgaggacctgatcgagcgcgag
gagatggtcgtcaccgtcacccacggcggctacatcaagcgcaccccgctcgacaccttc
cgggcgcagggccgcggcggcaagggccgctcgggcatggcgaccaaggacgaagacgcc
gtcgtcgagctgttcgtgaccagcacccacaacccggtgctgttcttcaccaacaccggg
cgcgtctaccgcatgaaggtgtggaagctgcccgaaggcggcccccagaccaagggtcgc
ccgatggtcaacctccttccgctgggcgaggacgagcgcgtcaccaacgtgctgcccctg
cccgaggacgaggcgagctgggccgacctcaatatcgtcttcgccaccgagcagggcatg
gtccgccgcaactcgatggacgccttcgccaacatcccgaccgcgggcaagtatgcgatg
ggcttcgtcgagggttcgggcgaccggctgatcggggtgcaattgctcaccgaagaccag
cagatcttcctcgccagcgacagcggcaaggcgatccgcttctccgccaccgacgcgcgc
gagaccaagagccgcaccggcatcggggtacgcggcatgagcctgaagaagggcggcaag
gtcgtcagcatggcggtgcttgccccgctcactgccgacatggaaacgcgcgaggcctac
gtccgcgcggcggcatggaagaacaacggcgccgtgccgaccctgcccgccgatcaggtg
gcggcaatggcggaggccgaggaattcatcctcaccatcaccgccaacggctacggcaag
atctcgtcggcctacgaataccgcaccacatcgcgtggcggacagggcatcaccaatatc
ggtgcgcccgagagcaatccggaacgcaacggcccggtggttgccagcttccccgtcaag
cacggctcgcagctgatgctggtgaccgaccaggccaagctgatccggctcggcatcgac
ttccgccacctgatcgagggcggattcgagagcctcaagggcttcagcatctcgggccgc
ggctcgtccggcatccgcatcttcgatgtcgccaagggcgaacacatcgtcggcgcggcg
ctgatcgacgagaccgaggagccggagaacccggccgaggaagcgatcgctgcggaactt
gcgggcaagaccgagccgcccgtcacctga
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