Porphyrobacter sp. CACIAM 03H1: CBR61_11380
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Entry
CBR61_11380 CDS
T09981
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
porc
Porphyrobacter sp. CACIAM 03H1
Pathway
porc03030
DNA replication
porc03430
Mismatch repair
porc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
porc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBR61_11380
03430 Mismatch repair
CBR61_11380
03440 Homologous recombination
CBR61_11380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
porc03032
]
CBR61_11380
03400 DNA repair and recombination proteins [BR:
porc03400
]
CBR61_11380
Enzymes [BR:
porc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBR61_11380
DNA replication proteins [BR:
porc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CBR61_11380
DNA repair and recombination proteins [BR:
porc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CBR61_11380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
COE1_HLH
DUF655
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
ASJ92608
UniProt:
A0A2Z2PCC1
LinkDB
All DBs
Position
complement(2380781..2384377)
Genome browser
AA seq
1198 aa
AA seq
DB search
MPFAPFVPLRVMSSYSMLEGAIDPKEIAKLAKERGFPAIAICDRNGLYGIMAFAAACKGE
GVQPIIGALLGVARDETRGVVDYLPLFAQDDAGYDNLCHLVSAAHLDRPLERDPHVTLAD
LEGRTDGLIALTGAGEGGLTRLLAEGQQEAAERLAERLEALFPGRLYIELARTGDPVCER
AEDALVDLAYARDLPLVATNPANFAEPHMHKAHDAMLCIAHSTQIEAEDRPRSNPQAFVK
SASMMEEAFADLTEATANTLVIAQRCAFAPPYRKPILPSLAGDLAGEARMLAEDSRKGLV
ERLAAYYPDTVRAELVEALLLPSAEAMEEQEQSFDALRMNGVWDEVLTYKRRLEFEIDVI
VKMGFPGYFLIVADFIKWAKEQGIPVGPGRGSGAGSAVAWALTITDLDPIKLGLLFERFL
NPERVSMPDFDIDFCETRRGEVIRYVQRKYGGDHVAQIITFGKLKARAVLRDCGRILQMS
YGQVDRLCKMVPNHPTDPWTLPRSLNGAADFKREYDNDKEVKRLVDLAMQLEGLPRNSST
HAAGVVIGDRPLAKLVPLYRDPRSDMPVTQFDMKYVESSGLVKFDFLGLKTLSVLRKAVD
LLEKRGIAIDLGALPLDDAQVYHLMQAGNTVGVFQLESEGMRRTLKAVKPTNFGDIIALV
SLYRPGPMDNIPLFGQRKAGQVPIEYPHPKLEGILAETYGIFVYQEQVMQAAQVLAGYSL
GDADLLRRAMGKKVQAEMDAQRGRFVEGCKAVSDIEPKRANELFDLIDKFAGYGFNKSHA
AAYALLAYQTAWMKAHYPEEFYAASMCFDMHQSEKLNVFVDDARRYPNGHGGVEVLAPCI
NASEAEFTVEQTDTGYAVRYALAGIRNVGEKAMEAIVAEREANGPFASLKDLFERLPQGT
MNRRQLEGLICAGALDALEPDRALLFANAEHLMAVADAAIRERSSGQAGLFGGDAGPAED
LRLQPCDPWSRTDRMARERENFGFYFSAHPVAQYRDVASANGARTYQSLMEAGAPVGGRG
SAVMAVLVEGITKARTRKGGTFVRADFSDASGQFSAACFEEALVPDFERWAQAGECLLLT
VELDSPNPDEPPRLTVRGARPLAAVSGSTAMELTADIAHAEALRELEIELSAARGERPTG
AGEVVVRLALADGGQAEMRLGRSFVLTGELAERLAAVEGISRVALVPLKKRGNLRLVA
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgccctttgcccccttcgttcccctgcgcgtgatgtcgtcctattcgatgctcgaaggg
gcgatcgacccgaaggaaatcgccaagctggccaaggagcgcggctttccggcgatcgcg
atctgcgaccgcaacgggctctacggcatcatggccttcgctgcggcgtgcaagggtgag
ggcgtgcagccgatcatcggcgccttgctgggcgtcgcgcgggacgagacccgcggggtg
gtcgactacctgccgctcttcgcacaggacgatgcgggctacgacaacctgtgccatctc
gtctcggcagcgcatctcgatcgtccgctggagcgcgatccgcacgttaccctcgccgat
ctggagggccgcaccgatggcttgatcgcgctcaccggcgcgggcgaggggggactgacg
cggctactcgccgaggggcagcaggaggccgccgagcgtctggccgagcggctggaggcg
ctgttccccgggcgcctctacatcgaactggcgcgcacgggcgatccggtctgcgagcgg
gccgaggatgcgctggtcgatctcgcctatgcccgcgatctgccgctggtcgccaccaac
cccgcgaacttcgccgaaccgcacatgcacaaggcgcatgacgccatgctgtgcatcgcc
cattcgacccagatcgaggcggaggaccgtccgcgctccaaccctcaggctttcgtcaaa
tccgcgagcatgatggaggaggcattcgcggatctcaccgaggcgaccgccaacaccctc
gtcatcgcccagcgctgcgccttcgcgccgccctatcgcaagccgatcctgccgagcctc
gcgggcgaccttgccggcgaggcgcggatgctggcggaggattcgcgcaagggtctcgtc
gaacggctggccgcttactaccctgacaccgttcgggctgagcttgtcgaagccctgctc
ttgccttcggccgaagcgatggaagagcaggaacagtctttcgacgcgctcaggatgaac
ggggtgtgggacgaggttctcacctacaagcgtcgcctcgaattcgagatcgacgtgatc
gtgaagatgggttttcccggctacttcctgatcgttgccgacttcatcaagtgggccaag
gaacagggcattccggtggggcccgggcgcgggtccggcgcgggctcggcggtcgcctgg
gcgctgaccatcaccgatctcgatccgatcaaactgggcctgctgttcgagcgcttcctc
aacccggaacgcgtctcgatgcccgacttcgacatcgacttctgcgaaacccgccgcggc
gaggtgatccgctacgtccagcgcaagtatggcggcgatcacgtcgcgcagatcatcacc
ttcggaaagctgaaggcccgcgccgtgctgcgcgactgcgggcgtatcctgcagatgagc
tacgggcaggtcgaccggctgtgcaagatggtgcccaaccatccgaccgacccctggacc
ctgccgcgctcattgaacggcgcggcggatttcaagcgcgaatacgacaacgacaaggaa
gtgaagcgcctcgtcgacctcgcaatgcaattggagggcctgccccgcaattcctccacc
catgccgcgggcgtggtgatcggcgaccggccgctcgcgaagctcgtgccgctctaccgc
gacccgcgctcggacatgccggtgacgcagttcgacatgaaatatgtcgaaagctctggc
ctcgtgaaattcgacttcctcggcctcaagaccctgtcggtgctgaggaaggccgtcgat
ctgctggagaagcgcgggatcgccatcgacctcggcgcgctgccgctcgatgatgcgcag
gtctatcacctcatgcaggcgggcaacaccgtgggggtgttccagttggaatcggaaggc
atgcgccggacgctcaaggcggtgaagccgaccaatttcggggacatcatcgcgctcgtc
tcgctctaccgccccggcccgatggacaacatcccgttgttcggccagcgcaaggcgggg
caggtgccgatcgaatatccgcaccccaagctggaaggcatccttgccgagacctacggg
atcttcgtctaccaggaacaggtgatgcaggccgcgcaggtgctcgccggttactcgctt
ggggacgcggacctgctgcgccgcgcgatgggcaagaaggtgcaggccgagatggacgcc
cagcgcgggcgtttcgtcgaaggctgcaaggcggtctccgacatcgaacccaagcgcgcc
aacgagctgttcgacttgatcgacaagttcgctggctacggcttcaacaagtcgcacgcg
gcggcctatgcgctgcttgcctaccagaccgcgtggatgaaggcgcattatccggaagag
ttctacgccgcgtcgatgtgcttcgacatgcaccagtcggagaagctcaacgtcttcgtc
gacgatgcgcgccgctatccgaacgggcacggcggggtcgaggtgctggcaccctgcatc
aacgcctccgaggccgaattcaccgtcgagcagacagacaccggctatgccgtgcgctat
gcgctcgccggcatccgcaatgtcggcgagaaggcgatggaggcgatcgtcgccgagcgc
gaggcgaacgggcccttcgccagcctcaaggacctgttcgagcggctgccgcagggcacc
atgaaccgccgccagctcgaagggctgatctgcgccggcgccctcgatgcgctcgagccc
gaccgcgcgctgctgtttgccaatgccgagcacctgatggcggtggcggatgccgcgatc
cgtgaacgcagcagcgggcaggcgggcctgttcggcggggatgccggacctgccgaggac
ctgcgcctccagccctgcgatccgtggtcgcgcaccgaccgcatggccagggagcgcgag
aatttcggcttctacttctccgcccatccggtggcgcaataccgcgatgtcgcctcggcc
aacggcgcgcgcacctatcagagcctgatggaggcgggcgcgccggttggcgggcgcggc
tcggcggtgatggcggtgctggtcgaaggcatcaccaaggcgcgcacccgcaagggcggc
accttcgtgcgggcggatttctcggacgcatcggggcagttctccgccgcctgcttcgag
gaggcactggtgcccgatttcgagcgctgggcccaggcgggcgagtgcctgctgctgacg
gtcgagctggattcgcccaatcccgacgaaccgccgcgcctcaccgtgcgcggcgcgcgg
ccgctggcggcggtcagcgggtcgacggcaatggaactgaccgccgacatcgcccatgca
gaggccctgcgtgaactcgagatcgagctttcggcggcgcgcggcgagcggcccaccgga
gcgggcgaggtggtggtgcggctggcgctggccgatggcgggcaggccgagatgcggctg
ggccgcagcttcgtgctgaccggcgaactcgccgagcggctcgcggcggtcgagggcatc
tcgcgggtcgcgctggtgcccctcaagaagcgcggcaatctcaggctggttgcctga
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