Porphyrobacter sp. CACIAM 03H1: CBR61_11515
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Entry
CBR61_11515 CDS
T09981
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
porc
Porphyrobacter sp. CACIAM 03H1
Pathway
porc00020
Citrate cycle (TCA cycle)
porc00190
Oxidative phosphorylation
porc00650
Butanoate metabolism
porc00720
Other carbon fixation pathways
porc01100
Metabolic pathways
porc01110
Biosynthesis of secondary metabolites
porc01120
Microbial metabolism in diverse environments
porc01200
Carbon metabolism
Module
porc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
porc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
porc_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
porc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CBR61_11515
00650 Butanoate metabolism
CBR61_11515
09102 Energy metabolism
00190 Oxidative phosphorylation
CBR61_11515
00720 Other carbon fixation pathways
CBR61_11515
Enzymes [BR:
porc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CBR61_11515
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
DAO
Pyr_redox_2
Thi4
HI0933_like
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
ASJ91483
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Position
complement(2408973..2410841)
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AA seq
622 aa
AA seq
DB search
MATSAAHGTANDVGGAHLKGAYTIVDHTYDVVVVGAGGSGLRATMGAAEAGLRTANISKV
FPTRSHTVAAQGGIAASLGNNSPDHWTWHMYDTVKGSDWLGDQDAIEYLAREAPAAVYEL
EHAGVPFSRNADGTIYQRPFGGHMQNMGAGPPVQRTCAAADRTGHAMLHALYQQSLKYDA
DFFIEYFALDLIMAERDGVKQCVGVMAMCLDDGKIHRFRAQSVVLATGGYGRCYYTATSA
HTCTGDGGGMVLRAGLPLQDMEFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMER
YAPSAKDLASRDVVSRSMALEMREGRGVGPEGDHIYLHLDHIDPKVLAERLPGITESGKI
FAGVDLTRQPLPVTPTVHYNMGGIPCNYHGQVVTLGPDGNPDQVIPGLYAVGEAACVSVH
GANRLGSNSLIDLVVFGRATGHHLRDNLKPGAKQPELPADSADFALTRLDHFRYASGGSP
TAQIRAEMQKAMQKHCAVFRDQKLMDEGVAKLAEQNKRMEDIHVTDKSLIWNSDLIETLE
LDNLMAQANVTMASAANRKESRGAHAHEDYPERNDKEWMKHTIAWFDGWGGRGSNIRIDY
RPVHEYTLTDDIAYIEPKARVY
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgtcggcagcacacggaaccgccaacgatgtggggggcgcccacctgaagggt
gcctataccatcgtcgaccacacctatgacgtcgtcgtggtcggtgcgggcggatcgggc
ctgcgcgcgacgatgggcgccgcggaagcgggccttcgcaccgcgaacatctccaaggtc
ttccccacccgctcgcacaccgtggcggcgcagggcgggattgccgcctcgctcggcaac
aattcgcccgaccactggacctggcacatgtacgacaccgtcaaggggtcggactggctg
ggcgaccaggacgcgatcgaatatctcgcgcgcgaggctccggcagcggtctacgaactg
gagcacgcgggcgtgcccttcagccgcaatgccgacggcacgatctaccagcgacccttc
ggcgggcacatgcagaacatgggcgccggcccgccggtgcagcgcacctgcgccgcagcc
gaccgcaccggccacgccatgctccacgcgctctatcagcagtcgctgaagtatgacgcg
gacttcttcatcgaatacttcgcgctcgacctcatcatggccgagcgggacggggtgaag
cagtgcgtcggcgtgatggcgatgtgcctcgacgacgggaagatccaccgtttccgcgcg
cagtccgtggtgctggcaacgggcggctatggccgctgctactacaccgccacatcggcc
cacacctgcaccggcgacggcggcgggatggtgctgcgcgccggcctgccgctgcaggac
atggagttcgtgcagttccatccgaccggcatctacggcgcgggcgtgctcatcaccgag
ggcgcgcgcggcgagggcggctacctcaccaactcggaaggcgagcgcttcatggagcgt
tacgcgcctagcgccaaggacctcgcctcgcgtgacgtggtcagccgttcgatggcgctc
gagatgcgcgagggccgcggcgtcgggccggagggcgatcacatctacctccacctcgac
cacatcgatcccaaggtgctcgccgagcgcctgccgggcatcaccgagagcggcaagatc
ttcgcgggcgtcgacctcacccgccagccgctgcccgtcaccccgacggtgcattacaac
atgggcggcatcccgtgtaactaccacgggcaggtcgtcaccctcgggccggacggcaac
cccgatcaggtcatcccgggcctctatgccgtgggcgaggcggcctgcgtgtcggtgcac
ggggcgaaccgcctcggctcgaactcgctgatcgacctcgtggtgttcggccgcgcgacc
ggccaccacctgcgcgacaacctgaagcccggcgcgaagcagcccgagctgcccgccgac
agcgcggacttcgccctgacccggctcgaccacttccgctacgccagcggcggctcgccg
accgcgcagatccgtgcggagatgcagaaggcgatgcagaagcactgcgccgtgttccgc
gaccagaagctgatggacgagggcgtcgccaagctcgccgagcagaacaagcggatggag
gatatccacgtcaccgacaagtcgctgatctggaacagcgacctgatcgagacgctcgag
ctcgacaacctcatggcgcaggccaacgtcaccatggcgtcggccgccaaccgcaaggaa
agccgcggcgcccatgcgcacgaggactaccccgagcgcaacgacaaggaatggatgaag
cacaccatcgcctggttcgacggctggggcggtcgcggcagcaacatccgcatcgattac
cgcccggtccacgaatacacgctgaccgacgacatcgcgtatatcgagcccaaggcgcgg
gtgtactga
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