Porphyrobacter sp. CACIAM 03H1: CBR61_12025
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Entry
CBR61_12025 CDS
T09981
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
porc
Porphyrobacter sp. CACIAM 03H1
Pathway
porc03420
Nucleotide excision repair
porc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
porc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CBR61_12025
03430 Mismatch repair
CBR61_12025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porc03400
]
CBR61_12025
Enzymes [BR:
porc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBR61_12025
DNA repair and recombination proteins [BR:
porc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBR61_12025
MMR (mismatch excision repair)
Other MMR factors
CBR61_12025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
Tudor_1_RapA
Motif
Other DBs
NCBI-ProteinID:
ASJ91575
UniProt:
A0A2Z2P7S3
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All DBs
Position
2511421..2513727
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AA seq
768 aa
AA seq
DB search
MSPPLPSPAAPPESVPAYAARLNPPQRAAVLATEGPVLMLAGAGTGKTAALTSRLAHLVA
TGRAWPSQILCVTFTNKAAREMRERVAHHLGPAAEGLPWLGTFHSICAKMLRRHAELVGL
QHNFTIIDTDDQLRVLKALITEADLDEKRWPARQLAGLIDRWKNRGLNPSDLDAVENEAY
ANGRGAALYGRYQERLKQLNACDFGDLMLHMLNILKQHHDILADYQRRFRYIMVDEYQDT
NAVQYLWLRLLAQGHRNICVVGDDDQSIYSWRGAEVANILRFEKDFPGAEVIRLEQNYRS
TPHILGAASGLIRANSQRHDKTLWTEVNGGDKVKVIGVWDAPEEARRVGEAIERLEREGA
GLDQVAILVRAQYQTREFEDRFIQIGVAYRIIGGFRFYERAEIRDALAYLRLIAQPQDDL
AFERIHNVPKRGLGAKALEAMHSHARRTGLPLAAAALQLADSDELPKRAAITIGGLMRQF
LHWRQQAETLSPADLLRLVMEESGYNAMLAADRSPESAGRAENLSELARAMEEYETLGDF
LEHVSLVMDNDRANEGETVTIMTIHAAKGLEFDNVFCVGWEEGVFPSQRAIDEGGLASLE
EERRLAYVAITRARRHCTILHAANRRIYGQWTSSIPSRFIDELPAEHIEQQTTLTGGASL
WRANWSEQEDPFAHVAQSRPDRAQARGPGWRRAIASGYDTTPARVRENTRSAASFAAPAR
SDIAIGAMVTHAKFGTGCVIDQEGNKLTILFEEAGEKRVLDSFVTVVG
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcccctgccctcccccgccgctccgcccgagtcggtgcccgcttatgccgcg
cggctgaacccgccgcagcgtgcggccgtgctggcgaccgaggggcccgtcctcatgctt
gccggcgcgggaacggggaagaccgccgcgctcacctcgcgcctcgcgcatctggttgcg
acagggcgcgcctggccctcgcagatcctgtgcgtcaccttcaccaacaaggcagcgcgc
gaaatgcgcgagcgcgtggcacaccatctcggcccggcggcggaggggctgccgtggctc
ggcaccttccattcgatctgcgccaagatgctgcgccgccatgccgagctggtcggcctg
cagcacaatttcacgatcatcgacaccgacgaccagctgcgggtgctgaaggcgctgatc
accgaggccgatctcgacgagaagcgctggcctgcgcggcagcttgccggcctgatcgac
cgctggaagaaccgcggcctcaatccgtcggacctggatgcggtggagaacgaggcctat
gccaacggccgcggcgcggcgctctatggccgttatcaggagcgcctcaagcaactgaac
gcctgcgatttcggcgatctgatgctgcacatgctgaacatcctgaagcagcatcacgac
atccttgccgattaccagcgccgcttccgctacatcatggtggacgagtaccaggacacc
aatgccgtccagtacctgtggctgcggctcctcgcccaagggcacaggaacatctgtgtg
gtcggggacgatgaccagtcgatctattcctggcgcggggccgaggtcgccaacatcctg
cgcttcgagaaggatttcccgggcgccgaggtgatccggctcgaacagaactaccgctcc
accccgcacatcctcggcgcggcatcggggctgatccgcgccaattcgcagcgccacgac
aagaccctgtggaccgaggtcaacggcggcgacaaggtcaaggtcatcggcgtctgggac
gcgcccgaggaggcgcgccgggtgggcgaggcgatcgagcggctcgagcgcgaaggtgca
ggcctcgatcaggtcgcgatcctcgtgcgcgcccagtaccagacgcgcgagttcgaggac
cgcttcatccagatcggcgtcgcctatcggatcatcggcggtttccgcttctacgagcgc
gccgaaatccgcgatgcgctcgcctatctgcgcctcatcgcccagccgcaggacgatctc
gccttcgagcgcatccacaacgtccccaagcgcgggcttggggccaaggcgctcgaggcc
atgcactcgcacgcccgccgcaccggcctgccgttggcggcggccgcgctgcaactggca
gacagcgacgagctgccgaagcgcgccgcgatcaccatcggcgggctgatgcgccagttc
ctgcactggcggcagcaggccgagacgctcagccccgcagacctgctgcggctggtgatg
gaagaatccggctacaacgcgatgctcgccgccgaccgctcgcccgagagcgcaggacgt
gcggagaacctctccgaacttgcgcgcgcgatggaggaatacgagaccctcggcgatttt
ctcgagcacgtcagcctcgtcatggacaacgaccgcgcgaacgagggcgagacggtgacg
atcatgacgatccacgctgccaaggggttggagttcgataacgtcttctgcgtcggctgg
gaggaaggcgtcttcccctcgcagcgcgcgatcgacgaggggggccttgcgtcactggag
gaggagcgccgcctcgcctatgtcgcgatcacccgcgcgcggcggcattgcaccatcctc
cacgccgccaaccgccggatctacggccagtggaccagctcgatcccttcgcgcttcatc
gatgaactgccggccgagcatatcgaacagcaaacgacgcttacaggcggcgcctcgctg
tggcgggcgaactggagcgagcaggaagaccccttcgcccacgtcgcccagagccgtccc
gaccgcgcgcaagcccgagggcccggctggcggcgcgccatcgcctcgggctacgacacc
acgcctgcccgggtgcgcgagaacacgcgatccgccgcaagcttcgccgcccccgcccgc
tccgacatcgcgatcggtgcgatggtcacccacgccaagttcggcacgggctgcgtgatc
gaccaagagggcaacaagctcaccatcctgttcgaggaagcgggcgagaagcgggtgctc
gacagcttcgtgacagtggtgggctga
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