Porphyrobacter sp. CACIAM 03H1: CBR61_12350
Help
Entry
CBR61_12350 CDS
T09981
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
porc
Porphyrobacter sp. CACIAM 03H1
Pathway
porc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
porc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CBR61_12350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
porc03021
]
CBR61_12350
03400 DNA repair and recombination proteins [BR:
porc03400
]
CBR61_12350
Enzymes [BR:
porc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CBR61_12350
Transcription machinery [BR:
porc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CBR61_12350
DNA repair and recombination proteins [BR:
porc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CBR61_12350
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
IDH
Phage_tube_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ASJ91627
LinkDB
All DBs
Position
complement(2583991..2585046)
Genome browser
AA seq
351 aa
AA seq
DB search
MSVNTKNWQELKKPNSLEIKDGGDRQRKAIFVAEPLERGFGLTLGNALRRVLLSSLQGAA
ITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMEGEGPKRLQLSATGPGEVRAGDI
AVTGDIEVMNKDLVICHLDEGATLNMELTADTGKGYSPAVANRPADAPIGLIPVDSLYSP
VRQVSYKVENARVGQELDYDKLSLTVETDGTVTPEDAVAYAARILQDQLTLFVHFEDGIP
QPVGQMIGHAVQPEESDANQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAE
MLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaacaccaagaactggcaggaactcaagaaacccaactccctggaaatcaag
gatggcggcgatcgtcagcgcaaggcgatcttcgtggccgaaccgctcgagcggggcttc
ggcctgacgctcggcaacgcgctgcgccgggtgctgctctccagcctgcagggcgccgcg
atcacctcgatcaagatcgagaacgtgctgcacgaattctcgagcctcgccggcgtgcgc
gaggatgtcaccgacatcgtcctcaacgtcaagcagatcgcgctgaagatggaaggcgaa
ggcccgaagcggctccagctttcggccactggcccgggtgaagtccgcgccggcgacatc
gctgtgaccggcgacatcgaggtgatgaacaaggatctcgtgatctgccatctcgacgaa
ggcgcgacgctcaacatggagctgaccgccgacaccggcaagggctactcgccggctgtc
gccaaccgtccggccgatgcgccgatcgggctgatcccggtcgactcgctctattcgccc
gtgcgtcaggtgagctacaaggtcgagaacgcccgcgtcgggcaggagctcgactacgac
aagctctcgctgactgtcgagaccgacggcaccgtcactccggaagacgccgtggcctat
gccgcgcgcatcctccaggaccagctaacgctgttcgtccacttcgaggacggcatcccg
cagccggtcggccagatgatcggccacgccgtgcagccggaagagagcgacgccaaccag
ctcaaccgctacctcctcaagaaggtggacgagctggagctctcggtgcgttcggccaac
tgcctcaagaacgacaacatcatctacatcggcgatctggtccagaagaccgaagccgag
atgctgcgcacgccgaacttcggccgcaagtcgctcaacgagatcaaggaagtgctctcg
agcatgggcctgcgcctcgggatggacatccctggatggccgcccgagaacatcgaggaa
atggccaagaagctcgaacaggaacttctcggttga
DBGET
integrated database retrieval system
