KEGG   Porphyrobacter sp. CACIAM 03H1: CBR61_13705
Entry
CBR61_13705       CDS       T09981                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
porc  Porphyrobacter sp. CACIAM 03H1
Pathway
porc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:porc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CBR61_13705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:porc03400]
    CBR61_13705
DNA repair and recombination proteins [BR:porc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CBR61_13705
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CBR61_13705
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 UB2H DUF87 AAA_16 AAA_22 Kinesin SWI2_SNF2 SRP54 Microtub_bd
Other DBs
NCBI-ProteinID: ASJ91873
LinkDB
Position
2861381..2863576
AA seq 731 aa
MAELVIRRGLDEPETGADFTPHRPARPDKSMGGIPFKLVSDYEPAGDQPTAIAELVGAAQ
EGEKTQVLLGVTGSGKTFTMAKVIETLQRPALILAPNKILAAQLYGEFKSFFPENAVEYF
VSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVIIVASVSCLYGIG
SVETYSAMIFDIKVGEVVDQRELIRKLVALQYKRNDAAFTRGCFRVRGDSLEIFPSHYED
MAWRVSFFGDEIEAISEFDPLTGTKGAALEKVRVYANSHYVTPGPTMKQAMAAIKFELEE
RLKELEIEGKLLERQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PENALLFVDESHQTVPQIGAMARGDHRRKLTLAEYGFRLPSCIDNRPLRFNEWDAMRPQT
FCVSATPGGWEMEQTGGVFAEQVIRPTGLIDPPVTIRPVEDQVQDCIAECKATAALGYRT
LVTTLTKRMAEDLTEFMHEAGVRVRYMHSDVETLERIELIRDLRLGVYDVLVGINLLREG
LDIPECGLVCILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRITGSMERALAETD
RRRAKQQAFNEEHGITPQTIKRNIHDIVAHTASQDSVVVDTGDEERNNLVGHNLRSYIED
LEKRMREAAANLEFEEAGRLRDEIRRLEADELGLPDDQKRAPIVGRSNEGKPGTRKTRYG
KTRYKRMGGKP
NT seq 2196 nt   +upstreamnt  +downstreamnt
atggccgaactcgtgatccgccgcggactggacgagcccgaaacgggcgcggacttcacc
ccccaccgccctgcgcgccccgacaagtcaatgggcggcatcccgttcaaacttgtgtcg
gactacgagccggcgggcgaccagccgaccgcgatcgccgaactggtgggcgccgcgcaa
gagggcgagaagacccaggtgctgctcggcgtcaccgggagcggcaagaccttcaccatg
gcgaaggtgatcgagacgctccagcgcccggcgctgatcctcgcccccaacaagatcctc
gccgcccagctctacggcgagttcaagagcttctttcccgagaacgcggtcgagtacttc
gtttcctactacgattactaccagcccgaggcctacgtcccgcgctccgacacctatatc
gagaaggagtcgagcgtgaacgaggcgatcgaccggatgcgccactcggccacccgggcg
ctgctcgaacgcgacgacgtgatcatcgtggcgtccgtgtcgtgcctctacggtatcggc
tcggtcgagacctattcggcgatgatcttcgacatcaaggtcggcgaggtggtcgaccag
cgcgagctgatcaggaagctcgtggccctgcaatacaagaggaacgacgccgccttcacc
cgcgggtgcttccgggtgcgcggcgacagcctcgaaatcttcccctcgcactacgaggac
atggcctggcgggtcagcttcttcggcgacgagatcgaggcgatcagcgagttcgatccg
ctcaccggcaccaagggcgcggcgctggagaaggtgcgggtctatgccaattcgcactac
gtcacgcccggcccgacgatgaagcaagccatggccgccatcaagttcgagctggaggag
cggctcaaggaactggagatcgagggcaagctcttggagcgccagcgcctcgagcagcgc
accaatttcgacctcgagatgatcgccgcgaccggcagctgcgcggggatcgagaactac
agccgcttccttaccggccgcctgcccggcgagccgccgccgaccctgttcgaatacctg
cctgaaaacgccctgctcttcgtcgatgaaagccaccagaccgtgccgcagatcggcgcg
atggcgcgcggggaccaccgccgcaagctgacgctcgccgaatacggcttccgcctgccc
tcctgcatcgacaaccggcccttgcggttcaacgagtgggacgcgatgcgcccgcagacc
ttctgcgtctcggccacccccggcggctgggagatggagcagaccggaggggtcttcgcc
gaacaggtgatccgccccaccggcctcatcgacccgcccgtcaccatccgtccggtcgag
gaccaggtgcaggactgcatcgccgagtgcaaggcgaccgccgccttgggataccgcacg
ctcgtcaccactctcaccaagcgcatggccgaagacctcaccgagttcatgcacgaggcg
ggcgtgcgcgtgcgctacatgcactcggacgtcgagacgctggaacgcatcgagctgatc
cgcgacctcaggctcggggtctatgacgtgctggtcggcatcaacctgctgcgcgagggt
ctcgacatccccgaatgcggcctcgtctgcattctcgatgccgacaaggaaggcttcctg
cgctccgaaacctcgctgatccagaccatcggccgcgccgcgcgcaatgtcgatggccgg
gtgatcctctacgccgaccgcatcaccggcagcatggagcgcgcgctcgccgaaacagac
cgccgccgcgccaaacagcaggctttcaacgaggaacacgggatcaccccgcagaccatc
aagcgcaacatccacgacatcgtcgcgcacaccgcctcgcaggacagcgtggtggtggat
acgggcgacgaggagcgcaacaaccttgtcggccacaacctgcgcagctacatcgaggac
ctggaaaagcggatgcgcgaggcggcggcgaacctcgaattcgaggaagccggaaggctg
cgcgacgagatccgccgtctggaggcggacgagctcggcctgcccgacgaccagaaacgc
gcgccgatcgtcggccgttccaacgagggcaagccggggacgcgcaagacccgctatggc
aagacacgctacaagcggatggggggcaaaccctag

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