Porphyrobacter sp. CACIAM 03H1: CBR61_14535
Help
Entry
CBR61_14535 CDS
T09981
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
porc
Porphyrobacter sp. CACIAM 03H1
Pathway
porc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBR61_14535 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porc03019
]
CBR61_14535 (pnp)
03016 Transfer RNA biogenesis [BR:
porc03016
]
CBR61_14535 (pnp)
Enzymes [BR:
porc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CBR61_14535 (pnp)
Messenger RNA biogenesis [BR:
porc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CBR61_14535 (pnp)
Transfer RNA biogenesis [BR:
porc03016
]
Prokaryotic type
tRNA degradation factors
CBR61_14535 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
S1_2
Peptidase_M64
Motif
Other DBs
NCBI-ProteinID:
ASJ92026
LinkDB
All DBs
Position
complement(3064186..3066474)
Genome browser
AA seq
762 aa
AA seq
DB search
MFDTKTVSLEWGGKTLTLETGRIARQADGAVLATYGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKFSAAGRIPGGFFKRERGATEKETLTSRLIDRPIRPLFPEGFYNEINVIAQVLSF
DGETEADIVAMIAASAALTISGVPFMGPIGAARVGYVDGEYVLNPKQDKALAEGRLDLVV
AATDKAVMMVESEAKELTEDEMLGAVMFAHDEIRKVIGAIVELAEKAAKDPWDIDVSDNT
ADIKAKLKELVGADIAAAYKLTDKSARSNALNEARAKAKAAFADETPQTQMVAIKTMKKV
EADIVRTAILKEGSRIDGRKLDQVRPIEAIVGFLPRTHGSSLFTRGETQAICTTTLGTKD
SEQMIDGLEGLSYSSFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALNPVLPSKED
FPYTIRVLSDITESNGSSSMATVCGGCLSMMDAGVPIKAPVSGIAMGLILEGDEFAVLSD
ILGDEDHLGDMDFKVAGTAEGITTMQMDIKVAGITQEIMAKALEQAKAGRQHILGEMAKA
LTGARSEVSKHAPRIETIQIDKSKIRDVIGTGGKVIREIVAETGAKVDIDDEGVIKISSS
NLDEIEAAKRWILGIVEEPEVGKIYSGKVVNIVDFGAFVNFMGGKDGLVHVSEMKNERVE
KPTDVVSEGMEVKVKVLEIDNRGKVRLSMRVVDQETGEELEDTRPPREPREPRGDRGDRG
DRRGPKGGRGGDRGGRDRDRGGDRGGRDRDSGPAGLPDFLKD
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacacgaaaaccgtatcgctggagtggggcggaaagaccctcactctggaaacc
gggcgtattgcccgtcaggccgatggcgccgttctggccacctatggcgaaaccgtggtg
ctctgcgccgtgaccgccgccaagagcgtcaaggaagggcaggacttcttcccgctcacc
gtgcactatcaggaaaagttctcggccgccgggcgcatcccgggcggcttcttcaagcgt
gaacgcggcgcgaccgagaaggaaacgctcaccagccgcctgatcgaccgtccgatccgc
ccgctcttccccgaaggcttctacaacgagatcaacgtgatcgcgcaggtcctgtcgttc
gacggcgagaccgaggccgatatcgtcgcgatgatcgcggcgtcggcggcgctcaccatc
tcgggcgtgcccttcatgggcccgatcggcgctgcgcgcgtcggttatgtcgacggcgaa
tatgtcctcaacccgaagcaggacaaggctctcgccgaaggccgtctcgacctcgtggtc
gccgcgaccgacaaggccgtgatgatggtcgaatccgaggccaaggaactgaccgaggac
gaaatgctcggagcggtgatgttcgcgcatgacgagatccgcaaggtgatcggcgcgatc
gtcgagctggccgagaaggccgccaaggatccgtgggacatcgatgtcagcgacaacacc
gccgacatcaaggcgaagctgaaggaactggtcggcgcagacatcgccgcggcctacaag
ctcaccgacaagtcggcgcgttccaacgcgctgaacgaggcgcgggccaaggccaaggcg
gcgtttgccgacgaaaccccgcagacccagatggtcgcgatcaagaccatgaagaaggtg
gaagcggacatcgtgcgcaccgccatcctcaaggaaggttcgcgcatcgacggccgcaag
ctcgatcaggtccgtccgatcgaggcgatcgtcggcttcctgccgcgcacccacggctcg
tcgctgttcacccgcggcgagacgcaggcgatctgcaccaccacgctcggcaccaaggat
tccgagcagatgatcgacggtctggaaggcctgagctattccagcttcatgctgcactac
aacttcccgccctattcggtcggtgaagtgggccgcttcggcgccccgggtcgccgcgaa
gtcggtcacggcaagctcgcctggcgcgcgctcaaccccgtgctgccgagcaaggaagac
ttcccctacaccatccgcgttctgtcggacatcaccgagtcgaacggctcgtcctcgatg
gcgacggtctgcggcgggtgtctgtcgatgatggacgcgggcgtgccgatcaaggcgccg
gtgtcgggcatcgccatgggcctgatcctcgaaggtgacgaattcgccgtcctctcggac
attctgggcgatgaagaccacctcggcgacatggacttcaaggttgccgggaccgccgaa
ggcatcaccacgatgcagatggacatcaaggtcgccggcatcacgcaggagatcatggcc
aaggcgctggaacaggccaaggccggtcgtcagcacatcctcggcgagatggccaaggcc
ctgaccggtgcccgcagcgaagtcagcaagcacgcgccgcgcatcgagacgatccagatc
gacaagtcgaagatccgtgacgtcatcggcaccggcggcaaggtgatccgcgagatcgtc
gccgaaaccggcgccaaggtcgacatcgacgatgaaggcgtgatcaagatctcgtcctcg
aacctcgacgagatcgaagccgccaagcggtggatcctcggcatcgtcgaggagccggaa
gtgggcaagatctactccggcaaggtcgtcaacatcgtcgatttcggcgccttcgtgaac
ttcatgggcggcaaggacggtctcgtccatgtctccgagatgaagaacgagcgtgtcgag
aagccgaccgatgtcgtctccgaaggcatggaagtgaaggtcaaggtcctcgagatcgac
aaccgcggcaaggtccgcctgtcgatgcgcgtggtcgaccaggaaaccggcgaagagctg
gaggacacccgtccgccccgcgaaccgcgcgaaccgcgcggtgaccgtggtgatcgcggc
gaccgtcgcgggcccaagggcggacgcggcggagaccggggcgggcgtgaccgcgaccgc
ggcggcgaccgtggcggtcgtgatcgcgacagcggtccggctggccttcccgacttcctg
aaggactga
DBGET
integrated database retrieval system
