Porphyrobacter sp. CACIAM 03H1: CBR61_15220
Help
Entry
CBR61_15220 CDS
T09981
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
porc
Porphyrobacter sp. CACIAM 03H1
Brite
KEGG Orthology (KO) [BR:
porc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
porc03009
]
CBR61_15220
Enzymes [BR:
porc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
CBR61_15220
Ribosome biogenesis [BR:
porc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CBR61_15220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
YuA_Gp49
Motif
Other DBs
NCBI-ProteinID:
ASJ92148
LinkDB
All DBs
Position
3215356..3216567
Genome browser
AA seq
403 aa
AA seq
DB search
MTAAPTNDNVRQFTVGPDDDGIRLDRWFKRNLPQVGFATVSRWARTGQIRVDGKRAKPED
RLTAGQVLRVPPGGEEPAREAAKPRARPLSPEQIAEAREMVIRETPTAIVLNKPPGLATQ
GGSKTTKHVDGLLDAFVEGNAPRPRLVHRLDKDTSGVLLIARTPGSAASFSKRFASRSAR
KVYWALVVGVPQLAEGVIDAPLGKQPGTGGEKMHIDEENGAAAKTRYRVVDRAGQRAAWV
ELEPLTGRTHQLRVHMAAIGHPIVGDGKYGGQDAFLTGAVSRKMHLHARRLIITEPKAGE
GSGGKLDVTAELPPHFAASMEVLGFDPALSDAAPLREEVPEKTPEEKKQAARRHFKQARK
EERAPRRARGSANAKAKPKPKGKGKGKPARPAKPKGPGKSPRR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgcccccaccaacgacaacgtccgccagttcaccgtcggcccggacgacgac
ggcatccggctcgaccgctggttcaagcgcaacctgccgcaggtcggcttcgccacggtg
tcgcgctgggcgcggaccgggcagatccgggtcgacggcaagcgcgccaagcccgaggat
cgcctcacggcagggcaggtcctgcgcgtgccgccgggcggggaagaacccgcgcgcgag
gcagccaagccccgcgcccgcccgctcagccccgaacagatcgccgaggcgcgcgagatg
gtgatccgcgagacacccaccgcgatcgtcctcaacaagcctcccggcctcgccacgcag
ggcgggagcaagacgaccaagcatgtcgacgggctgctcgatgccttcgtggaagggaac
gcgccgcgcccgcgcctcgtccaccggctcgacaaggacacctcgggcgtcctcctgatc
gcccgcaccccgggcagcgccgcgagcttctccaagcggttcgccagccgctcggcgcgc
aaggtctactgggcgctggtggtcggcgtgccgcagcttgccgaaggcgtgatcgacgcc
ccgctcggcaagcagccgggcacgggcggcgagaagatgcatatcgacgaggagaacggc
gcggcggccaagacccgttaccgcgtggtcgaccgggcgggccagcgcgcggcgtgggtc
gagctcgaaccgctcaccggccgcacccaccagctgcgcgtccacatggccgcgatcggg
cacccgatcgtgggcgatggcaagtatggcgggcaggacgccttcctgaccggcgcggtg
agccgcaagatgcacctccacgcccgccgcctcatcatcaccgagcccaaagcgggtgaa
ggcagcggcggcaagctcgacgtcaccgccgaactacccccgcacttcgccgccagcatg
gaggtgctcggcttcgacccggccctttccgatgccgcccccttgcgcgaggaggtgccc
gagaagacgcctgaggaaaagaagcaggccgcccgccgccacttcaagcaggcgcgcaag
gaagagcgcgccccccgccgtgcgcgcgggagcgccaacgccaaggcgaaacccaagccc
aagggcaagggcaagggcaagcccgccagaccggccaagcccaaggggcccggcaagagc
ccgcgccgctga
DBGET
integrated database retrieval system
