Porphyrobacter sp. CACIAM 03H1: CBR61_15370
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Entry
CBR61_15370 CDS
T09981
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
porc
Porphyrobacter sp. CACIAM 03H1
Brite
KEGG Orthology (KO) [BR:
porc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
porc03021
]
CBR61_15370 (rpoH)
Transcription machinery [BR:
porc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CBR61_15370 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ARA70
Aca2_YdiL
HTH_11
DUF8113
DUF612
Motif
Other DBs
NCBI-ProteinID:
ASJ92172
LinkDB
All DBs
Position
3244414..3245301
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AA seq
295 aa
AA seq
DB search
MSVPALSGEQSLNRYLAEIRKFPVLTAEQEYMLAKRYQEHEDPEAAAQLVSSHLRLVAKI
AMGYRGYGLPVADLISEGNVGLMQGVKKFEPDRGFRLATYAMWWIKASIQEYILRSWSLV
KMGTTAAQKKLFFNLRRMKKNLDAYEDSDLRPDDLTKIATDLGVPEQEVVNMNRRMMMGG
DASLNVSLRGAEEGSGEWQDWLADDRPLQDETVAENQEAQMRMEMLSEAMNSLNDRERHI
LTERRLTEKPQTLEELSQEYDVSRERIRQIEVRAFEKLQKAMQRIAGERLLQGVA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcccggcgctgagcggcgagcagtcgctcaaccgctatctcgccgagatccgc
aagttcccggtgctcaccgccgagcaggaatacatgctcgccaagcggtatcaggagcac
gaggatcccgaagctgccgcccagctcgtctccagccacctgcggctcgtcgcgaagatc
gcgatgggttaccgcggctatggcctgccggtcgccgacctgatctcggaaggcaacgtg
ggcctgatgcagggcgtcaagaagttcgaacccgatcgcggcttccgcctcgcgacctac
gcgatgtggtggatcaaggcctcgatccaggaatacatcctgcgctcgtggagcctcgtg
aagatggggaccacggcggcgcaaaagaagctgttcttcaaccttcgccggatgaagaag
aacctcgacgcctacgaggacagcgacctgcgtccggacgatcttaccaagatcgcgacc
gatctcggcgtgccggagcaggaagtcgtcaacatgaaccggcgcatgatgatgggcggc
gatgcctcgctcaacgtcagcttgcgcggggccgaggaaggctcgggcgaatggcaggac
tggctggcggatgaccgccccctgcaggacgagaccgtcgccgagaaccaggaagcgcag
atgcgcatggagatgctcagcgaggcgatgaacagcctcaacgatcgcgagcgccacatc
ctgaccgaacgccgcctgaccgagaagccccagacgctcgaggagctgtcgcaggaatac
gacgtcagccgcgaacgcatccgccagatcgaggtgcgcgccttcgagaagctccagaag
gcgatgcagcggatcgcgggtgaaaggctgctgcagggcgtcgcgtaa
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