Porphyrobacter sp. CACIAM 03H1: CBR61_15590
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Entry
CBR61_15590 CDS
T09981
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
porc
Porphyrobacter sp. CACIAM 03H1
Brite
KEGG Orthology (KO) [BR:
porc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
porc03009
]
CBR61_15590
Enzymes [BR:
porc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CBR61_15590
Ribosome biogenesis [BR:
porc03009
]
Prokaryotic type
ribosomal protein modification factors
CBR61_15590
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ASJ92211
UniProt:
A0A2Z2PAG4
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Position
3289494..3290867
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AA seq
457 aa
AA seq
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MNTAPLTLPDQKKIGMVSLGCPKALVDSERILTRLRADGYAFAEDYAGADVVLVNTCGFL
DSAKEESLAAIGEAIAENGRVIVTGCMGEEADAIRAVHPQVLAVTGAHQYEQVVEAVHTH
APPSQGPFVDLIPQPDIKLTPRHYSYLKISEGCNHSCAFCIIPALRGKLASRRIDAVLRE
AEKLVAAGTKELLVISQDTSAYGVDIRHEPRQWKGREVRAHMTDMARELGQLRTPEGQTP
WVRLHYVYPYPHVDQVIPLMAEGLLTPYLDIPFQHASPKVLKLMRRPANEAKVLERLKSW
RAICPDIAIRSSFVVGFPGETEEDFRYLLDWLEEAQLDRVGAFRFEPVEGAAANALPDQV
PEEVKEERYARIMEVTERISAAKLAAKVGRTLPVIIDEVGEPDEDGDIGATGRSQADAPE
IDGAVYLRNVPATLAPGDIVEATIEDAGAHDLFGVIA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgcccccctcaccctgcccgaccagaagaagatcgggatggtcagcctcggc
tgccccaaggcgctcgtcgattccgagcgcatcctcacccgtttgcgcgccgacggctat
gccttcgccgaggactatgcgggcgcggacgtggtgctggtcaacacctgcggcttcctc
gattccgccaaggaggagagccttgccgcgatcggcgaggcgattgccgagaacgggcgg
gtgatcgtcaccggctgcatgggcgaggaggcggacgcgatccgcgcggtccacccgcaa
gtcctcgcggtgacgggggcgcaccagtacgagcaggtggtcgaggctgtgcacacccac
gcgccgccctcgcaggggccgttcgtggacctcatccctcagcccgacatcaagctgacc
ccgcgccactacagctacctgaagatctccgagggctgcaatcactcctgcgccttctgc
atcattcccgccttgcgcgggaagctcgccagccgccgcatcgacgcggtgctgcgcgag
gctgagaagctggtcgctgcgggcacgaaggaactgctcgtcatctcgcaggacaccagc
gcctacggggtcgacatccgccacgagccgcgccagtggaagggccgtgaggtgcgcgcg
cacatgaccgacatggcgcgcgaactgggccagctgcgcacgcctgaaggccagacgccg
tgggtgcggctccactacgtctacccctacccgcacgtggatcaggtcatcccgctgatg
gccgaggggctgctgacgccctatctcgacattcccttccagcacgcctcgccgaaggtg
ctgaagctgatgcgccgccccgccaacgaggccaaggtgctcgaacggctgaagtcgtgg
cgcgcgatctgccccgacatcgcgatccgctccagcttcgtggtcggcttccctggcgaa
accgaggaggatttccgctatctcctcgactggcttgaggaagcgcagctcgaccgcgtg
ggcgccttccgcttcgagccggtcgagggtgccgccgccaatgccctgccagatcaggtg
ccggaggaggtcaaggaagaacgctacgcccggatcatggaggtgaccgagcgcatctcc
gccgccaagctcgccgccaaggtcggccggacgctacccgtcatcatcgacgaggtgggc
gagcccgacgaggacggcgatatcggcgccaccggccgcagccaggccgacgcgcccgag
atcgacggggccgtgtatctcaggaacgtccccgccaccctcgcccccggcgacatcgtc
gaggcgaccatcgaggatgccggcgcccacgacctgttcggggtgatcgcctga
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