Porphyrobacter sp. CACIAM 03H1: CBR61_16030
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Entry
CBR61_16030 CDS
T09981
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
porc
Porphyrobacter sp. CACIAM 03H1
Pathway
porc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
porc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CBR61_16030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porc03400
]
CBR61_16030
DNA repair and recombination proteins [BR:
porc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
CBR61_16030
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ASJ92278
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All DBs
Position
3378130..3378990
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AA seq
286 aa
AA seq
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MAARAYWSGQIRLALVSIPVEIFSATKSGAAIRFNQVHKPSGKRIAYEKVVPGIGPVNRD
HIIKGYEVEKGQYVLLEEREIEAVKLESKRTLELVQFVSGDEIDPLYFEKPYYVAPKDQL
AEEAFVVLREALRQSKKIALGQLAMRGSEKLVALKPCGKGLLLETLRYADEVRAGRSFFA
DIDDAKPDAELLDLATTLIDKRTAPFDAGEFENRYVEALKALIARKAKSKTGKAIIEDAG
EPAGRGAGNVVDLMAALKKSVGSEDGAASRKKTPAKRAPAAKRKSA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccgcgcctattggtccggccagatccgcctcgcactggtctcgatcccggtg
gagatcttctccgccaccaagtcgggcgcggccatccgcttcaaccaggtccacaagccg
agcggcaagcgcatcgcctacgagaaggtcgtgcccggcatcggcccggtgaaccgcgac
cacatcatcaagggctacgaggtcgagaaggggcaatatgtcctgctcgaggagcgcgag
atcgaggcggtgaagctggaaagcaagcgcacgctcgaactggtgcagttcgtttccggc
gacgagatcgacccgctctatttcgagaagccctattatgtcgcccccaaggaccagctg
gccgaggaggccttcgtggtgctgcgcgaggcgctgcgacagtcgaagaagatcgcgctc
ggacaactcgcgatgcgggggagcgaaaagctcgtggcgctgaagccctgcgggaagggc
ctgctgctcgagaccttgcgctatgccgacgaggtgcgcgccggacgcagcttctttgcc
gacatcgacgacgcgaagcccgatgccgagttgctcgatctcgccaccacccttatcgac
aagcgcaccgcccccttcgatgccggggagttcgagaaccgctatgtcgaggcgctcaag
gcgttgatcgcccgcaaggcgaaatccaagaccggcaaggcgatcatcgaggatgcgggc
gagccggccggcaggggcgcaggcaatgtcgtggacctgatggcggcactcaagaaatcg
gtcgggagcgaggacggggctgcgtcgcgcaagaagacgcccgcgaagagggcgcccgcg
gcgaagcggaagagcgcctga
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