Porphyrobacter sp. LM 6: BG023_111018
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Entry
BG023_111018 CDS
T04468
Name
(GenBank) DNA repair protein RadD
KO
K19789
DNA repair protein RadD
Organism
porl
Porphyrobacter sp. LM 6
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porl03400
]
BG023_111018
DNA repair and recombination proteins [BR:
porl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
BG023_111018
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Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_16
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AOL93959
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Position
1036334..1037938
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AA seq
534 aa
AA seq
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MSAPLTLRPYQEEALTNLWNWFSAGKRDCLVVLPTGAGKSLVIAEWAKLVFDTDPGACIL
VLTHVRELVEQNAAELAGLWPEAPWGIYSAGLGRRDIGAQLLFASIQSIHKKAYNLPRRV
DMVLIDEAHMIPRNADTMYGKFLADLRTINPALKIVGLTATPFRLDSGRLDQGEGALFDG
IAHETNVRELFDNGWLSPPVSYRQATQIDTSGVGTRGGEFIAAQLEASALDAHVVAAIAD
RIVEAGRDRQGWLVFGCTVKHCEALAEALNARGFSGTGVFGDTKKTERDRIIADFKAQRL
RFLVSQGVLTTGFNARHVDLVALARPTKSTGLYIQMVGRGTRLSPETGKTNCLILDFGGN
IARHGPFDDPSIPEKKKKGEGDAPYKECSECGCACGTMTRYCPACGFEFPPPERRVTTLP
AVRAILSTEPDWLEVKGVTYRRHEKPGSPPSLRVDYRTGLNSYREWICLEHTGYARAKAE
SWWLRRASAPVPSSIDAALERLQELNEPSHIRIRTKGKYTEISGHRFDARMLAA
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcccctgaccttgcgcccctatcaggaagaagcactcaccaatctgtggaac
tggttttcagccggcaaacgcgattgccttgtagtgctcccgaccggtgccggcaaaagc
cttgtcatcgccgagtgggcaaagctggtcttcgacaccgaccctggcgcctgcattctg
gtgctcacccatgtgcgtgagctcgtcgagcagaacgcagcggagctggccgggctttgg
cccgaggcgccttggggtatctattcagcagggcttgggcggcgggacattggcgctcag
ctattgttcgcctccatccagtcgatccacaagaaagcctacaatctgccgcgccgggtc
gacatggtgctcatcgacgaagcccatatgatcccgcgcaatgccgatacgatgtatggc
aagttcctggcggacctgcgtaccatcaaccccgcccttaaaatcgtaggcctgaccgcc
acccccttccgtctagatagcggcaggctcgatcagggcgaaggcgcgctgttcgatggc
atcgcccatgaaaccaacgtgcgcgagctattcgacaacgggtggctgtcgccgccagtg
agctatcgccaggcaacgcagatcgacaccagcggggttggcacccgtggcggtgaattc
atcgcagcacagctcgaagcttcagcgctggacgcccatgtggtcgctgcgattgcggac
cggattgttgaagcgggccgcgaccgacaaggctggctggtattcggctgcacggtcaag
cattgcgaggcgctggccgaggcgctcaatgctcgcgggttctccgggactggggtcttt
ggggacaccaaaaaaaccgagcgcgatcggatcattgctgatttcaaggcgcagcgcttg
cggttcctggtcagccaaggcgtgctcaccaccgggttcaacgcccggcatgtcgatctt
gttgccttggcgcgcccgaccaagtcgacgggcctctacatccagatggttggccggggc
acccgactgtcgcctgagaccggcaagaccaactgcttgatactcgactttggcgggaac
atcgcgcggcacggtcccttcgatgacccgtccatcccggagaagaagaaaaagggtgaa
ggtgatgcaccctacaaggagtgctcagagtgcggctgtgcttgtggaaccatgacccgg
tactgcccggcttgcgggttcgagtttcctccccctgaaaggcgggtgacgacgcttccg
gctgtgcgcgcgatcctctcaaccgagcctgattggctcgaggtgaaaggcgtgacctac
cgcaggcacgaaaagccgggatcgccgccatctttgcgggtagactatcgcaccgggctc
aacagctaccgtgaatggatctgcctggagcataccggatacgcgcgggcaaaagccgag
agttggtggctccgccgtgcctctgcaccagtcccgagcagcattgatgcagcccttgag
aggctgcaggagctgaacgagccctcccacatccgtatcaggacaaagggcaagtacacc
gagatttccggtcaccggtttgatgctcggatgctcgcggcatga
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