Porphyrobacter sp. LM 6: BG023_111217
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Entry
BG023_111217 CDS
T04468
Name
(GenBank) TonB-dependent outer membrane channel
KO
K02014
iron complex outermembrane recepter protein
Organism
porl
Porphyrobacter sp. LM 6
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
porl02000
]
BG023_111217
Transporters [BR:
porl02000
]
Other transporters
Pores ion channels [TC:
1
]
BG023_111217
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AOL94154
LinkDB
All DBs
Position
complement(1259731..1262901)
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AA seq
1056 aa
AA seq
DB search
MKSSLINRSNRVGLLVGVALGAIATSQPAFAQDAAAEEVSTEEATTADPADGIVVTGSRL
RSVTPFNSPDPIAVLDPEVAKKEGRTDLASTLQGSSIAAGSTQVTAALSSNFVTNGGPGA
QTIDLRGLGANRTLVLLNGRRAGPAGTRGGVSSFDLNVLPLSIVNDIQILKTGASSVYGS
DAVAGVVNIFTKNKLDGLTLDLNASVPFDSGGETFRVSGAWGKTFDRGHIMIAGDYTKTQ
ELARGDRAYLACPESNIFNEAGERSDLIDPRTGQPMCDDLRWGHIWTYNLIDNLRLDGPG
GPDTGIQTTPGAVNLLQYQYASGPGAGTLGIPAFGAPAYPGDFGAPAGWFPTGYNAASMA
VQNAYHPFVEQQTIIPETDLYTTYAEGAFEISSAVEVFGEFLFNRRETYQNGWRQFWNFG
YTGDVYGYGTGFGTLWAQGFTGINYLSPTGITDLSDSSQKVDYYRGVAGVRGELGGKGNW
TYDIHGQYSRSIGRYRSQQILQDAYDTGYFQTQSCVGTVTPISGRQCIDIPWTDPFFLRG
ELTPQQAAFLTDWEEGRTLYTQKSAEASLSGELLNLPAGPLALAIGATIREDKINDTPGE
ITLAANAWGASASGITAGKSITSEAFAEVNIPVLNDITFIEDLTVSAAGRVTNVKATRAS
DGVDSSDNGNWTYKLGLNWTVTDWLRFRGSFGTSYRAPALFEQFLADETSFLPQNRIDPC
VAWGANLAAGAISQTRANNCAADGIPATYGGGGISATIISSGGLGILESETSEALVVGTI
LTPKISFLPDTDISIAVDFFDIKVEGEISQLGAGTILAGCYDSIAFATEPLCNLFTRGQN
ATAPFQIATVRDSFINVSSQRNRGIDLSFRAGHDLGSLGKLALTADMTWQIKDDSQLLPT
SPVLNENGLVGSPKWVGDFRANWEHPSGFSLFYGVNVIGSASNREIFDRGRPTANGCLNS
FNNQGTADPADDLPIYGRFCPDLDVPATFYHNISVTQEIADGRFTITAGVSNLFDTRPPR
VSVRNGNTVTMLGPVVAASQYDFVGRRGFINVSMKF
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgtctttgatcaatcgtagcaatcgagtgggtctgctggttggcgtcgcgctt
ggcgctatcgcaacctcgcaaccggcatttgctcaggacgccgcagcggaagaagtgtct
acagaagaggctaccacggctgatcccgccgacgggatcgtcgtgacggggtcccgcctc
cgttcggtcacaccgttcaacagcccggatccgattgcggtacttgatccggaagttgcc
aagaaggaaggtcgcaccgacctggcgagcacgctgcagggctcctcgatcgctgcaggc
tcgacgcaggtgactgcggcgctgtcgtccaacttcgtgaccaacggcggaccgggtgcc
cagacgatcgaccttcgcggtctcggcgccaaccgaaccctcgtcctgctgaatggccgt
cgcgccggtccggccggcacccgcggcggggtgtcgtctttcgacctcaacgtgctgccg
ctgtccatcgtcaacgacattcagatcctcaagaccggcgcatcgtcggtctatggttcc
gacgctgtcgcgggcgtggtgaacatcttcaccaagaacaagctggacggcctgacgctc
gatctcaacgcgtcggttccgttcgacagcgggggtgagacattccgggtcagcggcgcg
tggggcaagaccttcgaccgcggccacatcatgattgcgggtgactacaccaagacgcag
gaactggcccgcggcgaccgcgcctatcttgcatgcccggaatcgaacatcttcaacgaa
gctggcgaaaggtccgacctgatcgatccgcgcaccggccagccgatgtgcgacgatctg
cgttggggtcatatctggacctacaacctgatcgataacctgcggcttgatggcccgggc
ggccccgataccggcatccagaccacccccggcgccgtcaacctgctgcaataccagtat
gcctcaggccctggcgccggcacgctcggcattccggcctttggtgcgcctgcctatccg
ggcgacttcggtgcgccggccggctggttcccgaccggatacaacgccgcgtcgatggct
gtgcagaacgcctaccatcccttcgtcgagcagcagaccatcatccctgaaaccgatctc
tacacgacctatgccgaaggcgccttcgagatttcgagcgcggtcgaagtgttcggcgaa
ttcctgttcaaccgccgcgaaacctaccagaacggctggcgtcagttctggaacttcggt
tacacgggcgacgtctatggttacggcacgggcttcggtacgctctgggcgcaaggattt
accggcatcaactacctgagcccgaccggtatcaccgatctgtcggactcgagccagaag
gtcgattactatcgcggtgttgccggcgtccggggcgaacttggcggcaagggcaactgg
acctatgacatccacggccagtacagccgcagcatcggtcgttatcgcagccagcagatc
ctgcaggatgcctacgacactggctatttccagacccagtcctgcgtgggcaccgtcacc
ccgatctcgggtcggcagtgcatcgacattccttggactgatccgttcttcctgcgcggc
gagcttacgccccagcaggccgccttcctgaccgattgggaagaaggccgcaccctgtat
acgcagaagtccgccgaagcgtcgctgtcgggcgaactgctcaatctgccggcagggcct
ctggcgttggcgatcggcgccacgatccgtgaagacaagatcaatgacacgccgggcgaa
atcactctggctgccaacgcctggggcgcttctgccagcggcatcacggctggcaagagc
atcacctccgaagcatttgcggaagtgaacatcccggttcttaacgacattacgttcatc
gaggatctgaccgtctcggctgccgggcgcgtcaccaacgtcaaggccacccgcgcctcc
gacggcgtcgacagcagcgacaatggcaactggacctacaaactcggcctgaactggact
gttactgattggctgcgtttccgtggcagcttcggcacgtcctaccgtgcgccggcgctg
ttcgagcagttccttgccgacgaaaccagcttccttccgcagaaccgcatcgatccttgc
gttgcatggggtgcgaacctggctgcgggtgccatttcgcagacccgggcgaataactgc
gcagctgacggcattccggccacctacggcggcggcggcatcagcgcgacgatcatttcg
tcaggcggtctcggcattctcgaatccgaaacctctgaagccctcgtggtcggtacgatc
ctgaccccgaagatttcgttcctgccggatacggatatcagcatcgcggtcgatttcttc
gacatcaaggtcgaaggcgagatctcgcagctgggggcaggcacgatcttggctggttgc
tacgactcgattgccttcgcgaccgagccgctgtgcaacctcttcacccgcggtcagaac
gccacggctccgttccagatcgctacggtgcgggactcgttcatcaacgtgtcgagccag
cggaaccggggtatcgacctctcgttccgtgccggccacgatctcggctcgctcggcaag
cttgcgctgacggcggacatgacctggcagatcaaggatgattcccagctgctgccgacc
tccccggttctcaacgaaaacggcctggtgggctcgcccaagtgggtgggtgatttccgc
gccaactgggagcacccgtcgggtttcagcctgttttacggggtgaacgtgatcggttcg
gccagcaaccgggagattttcgaccgcgggcggcccacggccaatggctgcctcaactcg
ttcaacaaccaaggcactgccgacccggcggacgacctgccgatttatggccgtttctgc
cccgacctcgatgtgcccgcgaccttctaccacaacatctcggtcacccaggaaatcgcc
gacggccgtttcacgatcacggctggtgtttcgaacctgttcgatacccgtccgccgcgc
gtctcggttcgcaacggcaacacggtcaccatgctgggtccggtggtcgcagcatcgcag
tacgactttgtgggtcgtcgcggcttcatcaacgtttcgatgaagttctga
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