Porphyrobacter sp. LM 6: BG023_111256
Help
Entry
BG023_111256 CDS
T04468
Name
(GenBank) autotransporter secretion inner membrane proteinTamB
KO
K09800
translocation and assembly module TamB
Organism
porl
Porphyrobacter sp. LM 6
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
porl02000
]
BG023_111256
Transporters [BR:
porl02000
]
Other transporters
Pores ion channels [TC:
1
]
BG023_111256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
AOL94193
LinkDB
All DBs
Position
1310014..1314231
Genome browser
AA seq
1405 aa
AA seq
DB search
MDETPMPPAETGTSARRRWGKRLGWLLALLLGPVVLIAGFFATPIGKRVIADQIAAVAPA
SGLRFKVGRIEGDIYGKAVLRRVVVSDPKGVFLTIPEVALDWRPLTWLWSGLDIRELTAR
RGRLERLPELLPADPDAPLLPDFDIRIDRLRVENLVIAKGVATARDERADLAAKVDIREG
RALIDATAKLGARDRIALLLDAEPDGDRFDLEGDYQAPADGVLAGLTGLKAGYTGRIVGE
GTWQRWRGAAVARRVGAVGKPVAALRISNDAGRYGVLGQVRAGMGDTTIAGRALGDVLSL
AASFTLEDSVVEGRMAAVSDALDWRSGGVVDLADKRVDGARVMLTMRDPDLFGDVVRLEG
AKLAANLSGDFDDLGIRHRIDVARLISGGVTATTLAQEGSARFDGTVLSVPMAVTGERVT
TGNAYADPRLVKGRISGVLTYDFARHRLAADAAKVTFPGLEAALTLRGDVPGGAYALAGP
VTARGLKIEGAGDVNASAKMLLKFGPKVPWSLRANLAGVLTRIGNSSVRHVAGDQVRFNG
ELGMGKGQQTVLREVALSSPRLTARFDSKVVPGSRGTRTMLAGSGRQVEYGPFSFEAEFA
ADGPRAQLVLADPYPAAGLKDVRVALAPSRDGFGLDVAGGSLLGPFEGALELFLPEGKPA
RIAINRLDVYRTNVTGGVVLGEEGVSGELRLAGGGIDGTLAFRPQGEGAVGFAVDLAARN
ARFGGDIPITIARADIAATGRYAEGNANFDADLAAAGVEYGALRLANLTAKAAIDNGRGK
IIGAISGRRADRFALNFDAAVAPRQIAAVVRGQYAGATITMPRRAVLNREEDGSWRLEPA
QIGFASGYAIASGHLGGEDTALELKLARMPLRLLDLAGAQLGLGGRMSGIVEYRQQGRAA
PTARARVRIDRFSRAGLVLSSKPVNVLGVIDLSADRLTAAGRLLEGDARRGDFALRINGL
EADGALADRLKRGRLDARMVFDGAAETLWRLAAVDLFDLTGPVAMTARATGTLAEPRITG
TLASDDLTVASALTGTRIEKISARGRFAGSRLELTRFAGTTPGGGSVVGSGTVDLAGMSA
ARGPQLDLRAAVKNARLLDATGLRATMTGPLRIVSNGMGGTIAGRVRLNGARWALGNAAE
DVALPRIATREINGEDGRSRTQVSARGAAWRYLVDATAPNRVLVEGLGLESEWGIDIALR
GTVNDPRIGGSARLVRGDYTFAGTRFELTRGRILFDVNEPINPRLDILAEAARNNTNVDI
AITGNAQSPSIAFSSDPALPEEEILARLLFGGSVTSLSATDAVQLAAALAALQGGGAGLD
PIGDLRRSIGLDQLRIISADPLIGRGAGIAIGKNITRKIYVELVTDGRGYSATQVEYRIT
SWLALLGTVSTIGRDSVLAEISRDY
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atggacgagacgccgatgcctcctgccgaaaccggtacgagtgcgcgccgccgctggggc
aagcggctgggctggctgctggcgctgttgctagggccggtggtgctgatcgccgggttc
ttcgcgaccccgatcggcaagcgcgtgattgccgaccagatcgcggctgtcgccccggca
tcgggtctgcgcttcaaggtcggccggatcgagggcgatatctatggcaaggccgtgctg
cgccgggtggtggtgagcgatcccaagggagtgttcctgacaattcccgaagtcgcgctc
gactggcgaccgctgacctggttgtggagcggtctcgatatccgcgaactgaccgcgcgg
cgcgggcggctggagcgattgcccgagctgctgcccgccgatcccgacgcgccgttgctg
cccgatttcgatatccggatcgaccggctgcgggtcgaaaatctggtcatcgccaagggg
gtcgccacggcccgcgatgaacgcgcggatctcgccgccaaagtcgatatccgcgagggc
cgggcgctgatcgatgccacggcaaagctgggcgcgcgcgaccgcatcgccctgctgctc
gatgccgaacccgatggcgaccgcttcgatctcgaaggcgattatcaggccccggcggac
ggcgttctggcggggctgacggggctgaaggcgggctataccggacgcatcgtcggcgaa
ggcacgtggcagcggtggcgcggcgcggcggtggcacggcgggtcggcgcggttggcaag
ccggtcgcggcgctgcggatcagcaatgatgcggggcgctacggcgtgctcgggcaggtg
cgggccggcatgggcgataccaccatcgccggacgcgcgctgggcgatgtgctgtctctc
gccgccagcttcacgttggaagacagtgtcgtcgaagggcgcatggccgccgtttccgac
gcgctcgactggcgcagcggcggggtggtcgacctcgcggacaagcgggtcgacggcgcg
cgggtgatgctcacgatgcgcgatcctgacctgttcggcgatgtcgtgcggctggagggg
gccaagctcgccgccaatctttcgggcgatttcgatgatctcggcatccggcaccggatc
gatgtggcgcggctgatctcgggcggggtgaccgcgaccacgctggcacaggaaggcagc
gcgcggtttgacggcaccgtgctctcggtgccgatggcggtgacgggcgagcgggtgacg
accggcaatgcctatgccgatccgcggctggtcaagggccggatcagcggcgttctgacc
tatgatttcgcgcgccaccggctggcggcggacgcggcgaaggtgactttccccgggctg
gaggcggcgctgaccctgcgcggcgatgttccgggcggcgcctatgcgcttgccgggcca
gtgaccgcacgcggtctcaagatcgagggcgcgggcgatgtgaatgccagcgccaagatg
ctgctcaagttcgggcccaaggtgccgtggagcctgcgcgccaatctcgccggtgtgctg
accaggatcggcaattccagcgtccgccatgtcgcgggcgatcaggtgcgcttcaatggc
gaacttggcatgggcaagggccagcagaccgtgctgcgcgaggtcgcgctgtcgtccccg
cggctgaccgcccggttcgatagcaaggtggtgccgggcagccgaggcacgcgcaccatg
ctcgcaggcagcggacggcaggtggaatacgggccgttcagcttcgaggcggaattcgcc
gccgatggcccgcgcgcgcagctcgtgctggctgatccctatcccgccgccgggctcaag
gacgtgcgcgtggcgctcgcccccagccgtgacgggttcgggcttgatgtggcgggcgga
tcgctgctcgggccgttcgagggcgcgctcgaactgtttctgccagaagggaagcctgcg
cggatcgcgatcaaccggctcgatgtctaccgcaccaatgtcaccggcggggtggtgctg
ggcgaggaaggcgtatcgggcgaactgcggcttgccggagggggtatcgacggcacgctg
gcgttccggccgcagggcgagggcgcggtcggctttgcggtcgatctggcggcgcgcaat
gcccgcttcggcggcgacatcccgatcaccatcgcccgcgccgatatcgccgcgaccggg
cgctatgccgagggcaatgccaatttcgacgccgatctcgccgcagccggggtcgaatat
ggtgcgctcaggctcgccaatctcaccgccaaggccgcgatcgacaacggccggggcaag
atcatcggggcgatcagcgggcggcgggcagaccgcttcgcgctcaatttcgatgccgct
gtggcgccccgccagatcgcggcggtggtgcgcgggcagtatgccggggcgacgatcacc
atgccgcgccgcgcggtgctgaaccgcgaggaggatggcagctggcggctggaaccggcg
cagataggctttgccagcggctatgccattgcctcgggccacttgggcggcgaggacacc
gcgctcgaactcaagctcgcgcggatgcccttgcgcttgctcgaccttgccggggcgcaa
ctcggcctcggcggacggatgtcgggcattgtcgaatatcgccagcagggccgtgccgcc
ccgaccgcgcgcgcgcgggtgcggatcgaccgcttcagccgcgccgggctggtgctgtca
tccaagccggtcaatgtgctgggagtgattgacctgtcggctgatcgcctgaccgcggcg
ggccgcttgctcgaaggtgacgcgcggcgcggcgactttgcgctgcggatcaacggactg
gaggcggatggcgcgctggccgaccggctgaagcgcgggcggctcgatgcgcggatggtg
ttcgacggcgcggcagagaccctttggcggctggcggcggtcgatctgttcgatctgacc
gggccggtggccatgactgcgcgggcgacaggcacgctcgccgagccgcgcatcaccggc
acgcttgcgagcgatgatctgaccgtcgccagcgcgctgaccggcacgcggatcgaaaag
atcagcgcgcgcggccgctttgccggatcacggctcgaactgacgcgctttgccggaacc
accccgggtggcgggagcgtggtgggcagcggcaccgtggatctggcggggatgagcgcg
gcgcgcgggccgcagcttgatctgcgcgccgccgtcaagaatgcacgcctgcttgacgcc
accgggctccgggccaccatgaccgggccgctccggatcgtctcgaacgggatgggcggc
acgatcgccggacgggttcgcctgaatggcgcgcgctgggcgctgggtaacgccgccgag
gatgtggccctgccgcgcatcgccacgcgcgaaatcaatggcgaggatggacgcagccgc
acgcaggtttccgcgcgcggtgcggcatggcgctatctcgtcgatgccaccgcgcccaat
cgggtgctggtcgaagggctgggcctcgaaagcgaatggggtatcgacatcgcgctgcgc
ggcacggtcaatgatccgcgcatcggcggcagcgcgcggctggttcgcggggactatacc
ttcgccggcacccgcttcgagctgacccgagggcgcatcctgttcgacgtgaacgagccg
atcaacccgcggctcgacatcctcgccgaagccgcgcgcaacaacaccaatgtcgatatc
gcgatcaccggcaacgcccagtcgcccagcatcgccttctccagcgatcccgcgctgccc
gaggaggaaatcctcgcgcggctgctgttcggcgggtcggtcacctcgctttcggccacg
gatgcggtgcagctcgccgcagcgctggcggcgttgcagggcgggggcgcggggcttgac
ccgattggcgatctgcggcgctcgatcggactcgatcagctgcggatcatcagcgccgat
ccgctgatcggtcgcggcgcggggattgccatcggcaagaacatcacccgcaagatctat
gtcgagctggtgaccgacgggcgtggatacagcgccacccaggtcgaataccgcatcacc
agctggcttgcgctgctgggcacggtctcgaccatcgggcgcgacagcgtattggccgaa
attagccgggactactga
DBGET
integrated database retrieval system
