Porphyrobacter sp. LM 6: BG023_111344
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Entry
BG023_111344 CDS
T04468
Name
(GenBank) tRNA pseudouridine38-40 synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
porl
Porphyrobacter sp. LM 6
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
porl03016
]
BG023_111344
Enzymes [BR:
porl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BG023_111344
Transfer RNA biogenesis [BR:
porl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BG023_111344
Prokaryotic type
BG023_111344
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AOL94278
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Position
complement(1410131..1410892)
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AA seq
253 aa
AA seq
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MTRFALTLEFDGTPFFGLQRQSHGPSVQQSVEDALQRITGENVVMHSAGRTDAGVHALAM
RSHVDIEKPFDPFRLAAALNAQLRPDPIAVTACEVVAEDWHARFSCTGRRYLYRIANRRA
PLTLTRDRAWHVPQPLDAAAMHRAAQALVGRHDFTTFRSVHCQAADPVKSLDLLDVERVG
EEIHIHAAARSFLHHQVRSMVGCLKLVGAGTWPETRIAEALEARDRNALGLNAPPHGLYF
VEATYPDSREEKQ
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
gtgacccgtttcgcgctcaccctcgaattcgacggcacgccgttcttcgggctgcaacgc
cagagccacgggccgagcgtgcagcaatcggtcgaggatgcgcttcagcggattaccggc
gagaacgtggtcatgcattcggcagggcgcaccgatgcgggcgtccacgcgctggcgatg
cgcagccatgtcgatatcgagaagcccttcgatccgttccggctcgcggcagcgcttaat
gcccagcttcgccccgatcccatcgcggtcaccgcctgcgaggtggtggcggaggattgg
cacgcgcgcttttcctgcaccgggcggcgctatctctaccgcatcgccaaccgccgcgcg
ccgctcaccctgacgcgtgaccgcgcgtggcatgtgccccagccgctcgacgccgcagcg
atgcaccgcgccgcgcaggcgctggtgggaagacacgatttcaccaccttccgctcggtc
cattgtcaggctgccgatccggtgaagtcgctcgatctgctcgacgtggagcgtgtgggt
gaggaaatccacatccacgccgccgcgcgcagcttcctgcaccatcaggtgcgctcgatg
gtgggctgcctcaagctcgtgggcgcaggcacctggcccgaaacccgcatcgccgaagcg
cttgaagcgcgcgaccgcaacgctttggggcttaacgcgccccctcacggcctctacttc
gtcgaggcaacctacccggattcgcgagaggaaaaacaatga
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