Porphyrobacter sp. LM 6: BG023_111369
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Entry
BG023_111369 CDS
T04468
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
porl
Porphyrobacter sp. LM 6
Pathway
porl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BG023_111369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porl03019
]
BG023_111369
Enzymes [BR:
porl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
BG023_111369
Messenger RNA biogenesis [BR:
porl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BG023_111369
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AOL94303
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All DBs
Position
complement(1435762..1436955)
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AA seq
397 aa
AA seq
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MLRDLAEADWPHRAGLKALTAALGAENIRWVGGAVRDGLLGVPVNDVDCATLLMPAEVIA
RCGKAGIRTVPTGIEHGTVTAILKDGPVEVTTLRRDVATDGRRATIAFASDWPEDAARRD
FTINALYAHPETLEIADWFGGLDDLRAGRVRFIGDARQRIAEDHLRILRYYRFQTRFGAA
LDDVAEDACAELAHTLKGLSRERIAAELLALLALPDPHPTIARMRARGVLGVILPEACAP
QVALLEQLIAAERTQGIASDPVRRLAALLPPSPDVAETVAARLRLSKVQRGRLVSAAERS
AEDTADPHSLAYRLTTPLAIDRLLLLGGDARRLADWTVPVFPLKGGAIVARGVTAGPDVA
RLLQTIEARWVAEGFPDADRVNQMLAEELGTSAFRFD
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtgacctcgctgaggccgattggccgcaccgcgcgggcctcaaggcgctgacc
gctgcgctgggggccgagaacatccgctgggtcggcggggcagtgcgcgacgggctgctg
ggcgtgccggtcaacgatgtcgattgcgccacgctgctgatgccggccgaggtcatcgct
cgctgcggcaaggcggggatccgcaccgtgccgaccgggatcgagcacggcactgtcacc
gcgatcctcaaggatggcccggtcgaagtcaccacgctgcggcgcgatgtcgccaccgac
ggacggcgggccacgatcgcctttgcgagcgactggccggaggatgccgcgcggcgcgat
ttcaccatcaacgcgctctatgcccatcccgaaacgctggagattgccgactggttcggg
gggctcgacgatctgcgcgcgggccgagtgcgcttcatcggtgatgcccgccagcggatt
gccgaggatcacctcaggatcctgcgctactatcgcttccagacccgcttcggtgcggcg
ctggacgatgttgcggaggatgcctgcgccgaactcgcgcacaccctcaagggcctcagc
cgggaacgcatcgcggccgaattgctggcgctgctcgccctgcccgatccgcaccctacg
attgcgcggatgcgcgcacgcggcgtgctcggggtgatcctgcccgaagcctgcgcgccg
caagtggcactgctggagcaactgatcgcggcggaacgcacacagggcatcgcatctgat
ccggtgcgccgcctcgccgcgctgctgccgccctcgcccgatgtggccgaaacggtcgcc
gcgcgcctgcggctctccaaagtgcagcgcggacggctggtatcggcggccgagcgcagc
gccgaagatacggccgatccgcacagccttgcctaccgcctcaccaccccgcttgccatc
gaccgcctgctgctgcttggcggcgatgcgcgcagactggcggactggaccgttccggtc
ttccccttgaagggcggcgcaatcgtcgcccgaggagtcaccgcagggccggatgtggcg
cgcctgctccagaccatcgaggcgcgctgggtcgccgaaggcttccccgatgccgaccgc
gtcaaccagatgctcgccgaggaactaggaaccagcgccttccgcttcgattag
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