Porphyrobacter sp. LM 6: BG023_111557
Help
Entry
BG023_111557 CDS
T04468
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
porl
Porphyrobacter sp. LM 6
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porl03019
]
BG023_111557
Enzymes [BR:
porl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BG023_111557
Messenger RNA biogenesis [BR:
porl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BG023_111557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
HA2_N
Flavi_DEAD
Cas3-like_C_2
AAA_30
AAA_19
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOL94487
UniProt:
A0A1D7NL72
LinkDB
All DBs
Position
1612543..1614978
Genome browser
AA seq
811 aa
AA seq
DB search
MIPDLPINAVLPRIRDALADYGAGVLIAPPGAGKTTAVAPDLLGQAWCTGQIIITSPRRV
AARAAAERMAEILGEAPGETVGYMTRLDSKVSNRTRILVVTEAILVNRLVENPELPGVSA
LLFDEAHERALDSDLALALALETRAVLREDLRVLVMSATIDGTRFGRLLGEDAPVIESEG
RSFPLEIKWLGGDASLAIEDRMASAVITAWRETDGDILAFLPGVREIERVRERLESRLAD
PPIHPLHGQIEPAAQRAAIRRDPQGRRRIVLATAIAETSLTLDGVSVVVDSGLARLAEFD
RTAGTTHLVTRSASQASAAQRAGRAARQGPGVAYRLWEEAGHAGRPEFAPPEIVQADLAP
LLLRLAKWGTSDPAGLPWLDPPPEASVAAARTALEALGALDAAGRITPFGEAIASLPMSP
DQAATVLHGAAAGVGDEAARLVMLLQERGLGGRGEDLLQRMSRWRGDRAPRSVSAARIAQ
GWAGQAANLASVIGKSPATDAAEALALARPAFVARRRDQSGEQWLSVGGRGYVLDPASPL
ARAEWIVIGDAQGQAKGARITAGCEIASERIASLFARELEERVTARWNDEKERVEARRER
RLGAIVLASVPEPAPDPAAVTAMLVRQALARLERQFPDGFLARARFAGVAELSEDHLRAS
ADQWLVPLLAGRRDLDLPPHRFAEAALGAIDWNVRQAFERAAPSHFGTPADTRHAIDYAG
DDAPSVEVRVQALFGLDSQPMIGETPLLLKLTSPAGRPIQSTRDLPGFWRGSWRDVVKDM
KGRYPKHRWPDQPWLEKPSLKTKNAFNRSDS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgatccccgaccttcccataaacgctgtcctgccgcgcatccgtgatgcgttggccgat
tacggcgcaggcgtgctgatcgcgccgccgggggcgggcaagaccacggcggtggcaccc
gatctgcttgggcaggcatggtgcaccgggcagatcatcatcacctcgccgcgccgcgtg
gctgcgcgcgctgcggcggagcgtatggcggagatcctgggcgaagcgccgggcgagacc
gtgggttacatgacgcggctcgacagcaaggtctctaacagaacccgcatcctcgtcgtc
accgaggcgattctggtcaaccggctggtcgagaaccccgagcttcccggtgtttcggcg
ctgctgttcgacgaggcgcacgaacgcgcgctcgatagtgatctcgcgctggcgctggcg
cttgagacccgcgccgtgttgcgcgaggacctgcgtgtgcttgtgatgtcggccacgatt
gatggcacacgctttggccggttgctgggcgaagatgcgccagtcatcgaaagcgagggt
cgaagttttccgctggaaatcaagtggcttggcggagatgcctcgctcgcgatcgaagat
cgtatggcgagcgctgtgatcacagcgtggcgcgaaacggacggcgacatcctcgccttc
cttcccggcgtgcgcgagatcgagcgggtgcgcgagcggctggaatcgcgcctcgccgac
ccgccgatccacccgctccacggccagatcgaaccggcagcgcagcgcgccgccatccgg
cgcgatccgcaaggtcggcgccggattgtgctcgccactgcaattgccgaaacctcgctt
acgctcgacggggtgagtgtcgtggttgacagcggtcttgcacgtctcgccgagtttgac
cgcacggcaggcaccacgcatctcgtcacccgcagcgcctctcaggcctcggccgcgcag
cgtgccggtcgtgccgcacggcaggggccaggggtcgcctatcggctgtgggaagaagcg
ggccacgccggccgccccgaattcgcgccgccagagattgttcaggccgatctcgcccct
ctgctgttgcggctcgccaagtgggggaccagcgatccggcgggtttgccatggctcgac
ccgccgcccgaggcatcggttgccgccgcgcgaactgcgcttgaagctctcggcgcgctt
gatgcagccggtcgcatcacgccgtttggcgaagcgatcgccagtctgccgatgtcgccc
gatcaggccgccacggtcctccatggcgcagccgccggggtgggtgacgaggcggcgcga
cttgtcatgctgttgcaggaacgcgggctgggcgggcgcggcgaggacctgttgcagcgc
atgagccgttggcgcggggatcgtgcgccgcgctcggtctccgctgctcggatcgcgcaa
ggctgggcagggcaggcggccaatttggccagcgtgatcggcaagagtcctgcaaccgat
gctgcagaggcgctggcgctggcccgcccggccttcgtcgcacggcggcgcgaccaatcg
ggcgagcagtggttgagtgtaggagggcgcggttacgtgctcgatcctgcctcgccgctc
gcgcgggcggaatggatcgtgatcggcgacgcgcaaggccaggccaagggcgcgcgcatt
accgccggatgcgaaatcgcgtctgaacgcatcgcctcgctgttcgcgagggaacttgag
gagcgcgttacagcgcgctggaatgacgaaaaagaacgggtcgaggcgcggcgagagcgg
cgcttgggcgcaatcgtgctggccagcgttcccgaacctgcgcccgatccggcagcggtg
actgcgatgctcgtcaggcaggcactcgcccggcttgaacggcagttccccgatggtttc
ctggcgcgcgcgcggttcgccggggtggcagagctgtcggaggatcacttgcgggccagc
gccgatcaatggcttgtcccgctgctggccgggcggcgcgatctcgatctgccgccgcat
cgtttcgccgaggcggcgctgggtgcgatcgactggaacgtccggcaggcgttcgagcgc
gcggctccttctcacttcggcacacccgccgatacccgccatgcgatcgattatgcgggc
gacgatgcgccgagcgtcgaggtgcgggtgcaggctctgttcgggctggatagtcagccg
atgatcggcgagaccccgctgctgctcaagctgaccagccccgcgggaaggccgatccag
tcgacccgcgatctgcccggcttctggcgcggcagctggcgcgatgtggtgaaagacatg
aagggccgctatcctaaacaccgctggcccgatcagccatggctggaaaagccgagcctg
aagacgaaaaacgccttcaaccgcagcgattcgtga
DBGET
integrated database retrieval system
