Porphyrobacter sp. LM 6: BG023_111564
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Entry
BG023_111564 CDS
T04468
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
porl
Porphyrobacter sp. LM 6
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
porl03032
]
BG023_111564
03036 Chromosome and associated proteins [BR:
porl03036
]
BG023_111564
03400 DNA repair and recombination proteins [BR:
porl03400
]
BG023_111564
DNA replication proteins [BR:
porl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BG023_111564
Chromosome and associated proteins [BR:
porl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BG023_111564
DNA repair and recombination proteins [BR:
porl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BG023_111564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
VWA_3
HU-CCDC81_euk_1
2C_adapt
Motif
Other DBs
NCBI-ProteinID:
AOL94493
LinkDB
All DBs
Position
1620902..1621174
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AA seq
90 aa
AA seq
DB search
MNKNDLISAVADTSGLSKSDAASAVESVFDTITKALSGGDEVRLVGFGTFSVAKRKASTG
RNPRTGEPMKIKASIQPKFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacgacctgatcagcgccgtcgccgataccagcggtctgtccaagagcgat
gccgcgagcgcggttgaaagcgtgttcgacacgattaccaaggccctttcgggcggcgac
gaagtgcgtctggtcgggttcggcaccttctcggtggccaagcgcaaggcttcgaccggc
cgtaacccgcgcacgggagagccgatgaagatcaaggcgtcgatccagccgaagttcaag
gcgggcaagggtctgaaggacgcggtcaactaa
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