Porphyrobacter sp. LM 6: BG023_111583
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Entry
BG023_111583 CDS
T04468
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
porl
Porphyrobacter sp. LM 6
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
porl03016
]
BG023_111583
Enzymes [BR:
porl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
BG023_111583
Transfer RNA biogenesis [BR:
porl03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
BG023_111583
Prokaryotic type
BG023_111583
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AOL94511
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All DBs
Position
complement(1640279..1641346)
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AA seq
355 aa
AA seq
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MTRKLLFAGLALAVILVAAVMLFQRQAGERLFARGVTERIAEGRLQLGDGLHLILCGTGS
PLPNPARAGPCQVVVAGDQAFVVDIGEGGARNLNLMGFDIAGLDGVLLTHFHSDHIDGMG
PLALFYWTQGTASAPLPLYGPQGVEAVAQGFNAAYRLDHGYRVAHHGPKIVPPTGGGVAA
RPFTIGKEPLVVFERDGLKVTAFPVDHSPVRPAVGYRFDYKGRSLVITGDTARTASVEQA
AKGADILVHDALQPELVFSMTDALDAAGQENTATITRDILDYHASPEDAAQSAQVAGVQQ
LVLTHLVPPIPNAFFYPAFLGDAGDYFDGTIIVGEDGMIFSLLPGSDRIERDKRL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcaagttgttgttcgcaggactggcgctggcggtaattctggtggcagcggtg
atgctgttccagcggcaggcgggagaacgcctgttcgcgcggggcgtaaccgagcgcata
gcggagggccgcctgcaattgggcgacgggctgcacctgatcctgtgcggcaccggctca
cccctccccaatcccgcccgcgctggcccctgccaggtggtggtcgcgggcgatcaggcc
ttcgtggtcgatatcggcgaaggcggggcgcgcaacctcaacctgatgggcttcgatatc
gccgggctcgacggcgtgctgctgacccatttccactccgatcatatcgacggcatgggg
ccgctggcgctgttctactggacgcagggcactgccagcgcgccgcttccgctttatggg
ccgcagggggtggaagcagtcgcgcaagggttcaacgctgcctaccggctcgatcacggc
taccgcgtggcgcaccacgggcccaagatcgtgcccccgaccggcggcggcgtcgcagcg
cggccctttacgatcggcaaggaaccgctggtcgtgttcgaacgcgacgggctgaaagtc
accgccttcccggtcgatcactcaccggtgcggccagcggtgggctaccgcttcgattac
aagggtcgttcgctggtgatcaccggcgataccgcgcgcaccgcctcggtcgagcaagcc
gcgaaaggcgcggatattctcgtccacgatgcgctccagccggaactggtgttctcaatg
accgatgcgctcgacgcggccggtcaggagaacaccgcgaccatcactcgcgatatcctc
gattaccacgcttcgcccgaggatgcggcccagagcgcgcaggtcgccggggtgcagcag
ctggtgctgacgcacctcgtcccgccaatccccaatgccttcttctacccggccttcctc
ggcgatgccggtgactatttcgacggcacgatcatcgtcggtgaggacggaatgatcttc
tcgctcctgcccggatcagaccggatcgagcgcgacaagcggctctag
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