Porphyrobacter sp. LM 6: BG023_1116
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Entry
BG023_1116 CDS
T04468
Name
(GenBank) protein translocase subunit yidC
KO
K03217
YidC/Oxa1 family membrane protein insertase
Organism
porl
Porphyrobacter sp. LM 6
Pathway
porl02024
Quorum sensing
porl03060
Protein export
porl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
BG023_1116
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
BG023_1116
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BG023_1116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
porl03029
]
BG023_1116
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
porl02044
]
BG023_1116
Mitochondrial biogenesis [BR:
porl03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
BG023_1116
Secretion system [BR:
porl02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
BG023_1116
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YidC_periplas
60KD_IMP
EMC3_TMCO1
Motif
Other DBs
NCBI-ProteinID:
AOL92975
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Position
complement(12561..14312)
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AA seq
583 aa
AA seq
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MDNRNLLLAVLLSGLLILGWDVGMRYFYPEAALTAEATEGKPAGANAAPAVSGDIGADTQ
AGRKIDLKAALASPNRVEIDTPRLAGSINLVGARIDDIVLKDYRETVKKDSGPVRLFAPE
GTAGQYFAEFGFVTGGMRQPSNLLWQADGTKLTPTTPVTLTRTDANGIIYRVRFAIDKNY
MITASQSATNAGAAAAIIQPFALIKRTSKTATIDQFATHSGPVGVFNDTLWDPHSYAELA
EIGGENPEGAPDWLGFVDQYWLGALVPGDGRGDVAVDKAGFRSLGNDLFRTDLLYAAKTV
AAGGSLTQETRLFAGAKESAVLDQYEESGITNFGLAISWGWFWFFEKPILWLLRTLNGLV
SNFGVAIILLTVIIRGLMFPIAQKGFASMAAMKAVQPKMKEIQERFKDDKQRQQQEIMKL
YKDEKVNPLSGCLPMLIQIPVFFALYKVLVLAIEMRHEPFMLWIKDLSAPDPAHILNLFG
MLPYDVPGFLAIGPLAVLLGITMWLTFKLNPSAMDPVQQQMFAIMPWILMFVMAPFAAGL
LLYWVTSNLLTVAQQSYLYSQHPQLKAANAKEKAERDRKKTQG
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
ttggacaatcgcaaccttctgctcgccgttctgctttcgggcctgctcattctcgggtgg
gacgtggggatgcgctatttctatcccgaagctgcgctgacggctgaagcgaccgagggc
aagcctgcgggcgcgaatgccgcaccggctgtttcgggtgatatcggcgccgatacgcag
gcgggtcgcaagatcgatctcaaggccgctcttgccagccccaaccgcgtcgagatcgat
acgccgcgcctcgccgggtcgatcaacctcgtcggtgcgcggatcgatgatatcgtgctc
aaggactaccgcgagacggtgaagaaggactccggcccggtgcgcctgttcgcgcccgag
ggtacggcgggccagtactttgccgagttcggcttcgtcaccggcgggatgcgccagccg
tccaacctgctgtggcaggctgacggcaccaagctgaccccgaccacgcccgttacgctg
actcgcactgatgcgaacggcatcatctatcgagtccgcttcgcgatcgataagaattac
atgatcaccgccagccagagcgccaccaacgccggcgctgcggctgcgattatccagccc
ttcgcactcatcaagcgcaccagcaagaccgccacgatcgatcagtttgcgactcattcg
gggccggtcggggtattcaacgatacgctgtgggatccgcactcctatgcggaactggcc
gagatcggcggcgaaaacccggaaggtgcgccggactggctcggcttcgtcgaccagtat
tggctcggcgctctggtccccggcgatggccgcggagatgttgcagtcgacaaggcgggc
ttccgttcgctcggcaatgatctgttccgcaccgatcttctttatgccgccaagaccgtg
gccgccggtggcagcctcacgcaggagacgcggctgttcgcgggcgccaaggaaagcgcg
gtgctcgatcaatacgaggaaagcgggatcaccaatttcggcctcgcgatcagctggggc
tggttctggttcttcgaaaagccgatcctgtggttgctgcggacgctcaacggtctcgtc
agcaatttcggcgtcgcgatcatcctgcttaccgtgatcatccgcgggctgatgttcccg
atcgcgcagaagggcttcgcctcgatggcggcgatgaaggccgtgcagccgaagatgaag
gagatccaggagcgcttcaaggatgacaagcagcgccagcagcaggaaatcatgaagctt
tacaaggacgagaaggtcaatcccttgtccggctgtctgccgatgcttatccagatcccg
gtgttcttcgcgctctacaaggtgctcgtgctcgcgatcgagatgcgccacgaaccgttc
atgctgtggatcaaggacctctcggcacctgacccggcacacatcctgaacctgttcggc
atgctgccctacgacgtgccaggcttccttgccatcggcccgctggcggtgctgctgggg
atcaccatgtggctgaccttcaagctcaacccgtcggcgatggacccggtgcagcagcag
atgtttgcgatcatgccgtggatcctgatgtttgtgatggcccccttcgcggcgggtctg
ctgctctactgggtgacctccaacctgctcaccgtggcgcagcagagctatctctactcg
cagcacccgcagttgaaggcggccaacgccaaggaaaaagccgagcgcgatcgcaagaag
acccaagggtag
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