KEGG   Porphyrobacter sp. LM 6: BG023_111688
Entry
BG023_111688      CDS       T04468                                 
Name
(GenBank) RNAse III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
porl  Porphyrobacter sp. LM 6
Brite
KEGG Orthology (KO) [BR:porl00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    BG023_111688
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:porl03019]
    BG023_111688
   03009 Ribosome biogenesis [BR:porl03009]
    BG023_111688
   03036 Chromosome and associated proteins [BR:porl03036]
    BG023_111688
Enzymes [BR:porl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     BG023_111688
Messenger RNA biogenesis [BR:porl03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     BG023_111688
Ribosome biogenesis [BR:porl03009]
 Eukaryotic type
  90S particles
   RNase
    BG023_111688
 Prokaryotic type
  rRNA processing factors
   BG023_111688
Chromosome and associated proteins [BR:porl03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     BG023_111688
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: AOL94614
LinkDB
Position
complement(1741848..1742534)
AA seq 228 aa
MSGLDPVTGEWLEAQGFAIHNPTVWLEALTHGSFNGAGPGGASDYQRLEFLGDRVLGLAV
ASWLFRAGDGPEGKLSQRLNALVSGSTCARIARVIGLPEHIRLGKQARDDGGADSDNILG
DVMEALIGACFIEQGFDAAQAIIYRLWAQELEGDVGKAKHPKSALQEWAAGNRRAGPVYE
VVDRSGPDHAARFTVRVSIRNVGSAEATATSKSEAEKLAAKAFLERFG
NT seq 687 nt   +upstreamnt  +downstreamnt
gtgagcgggctcgatcccgtcaccggcgaatggctcgaagcccagggcttcgcgatccac
aatcccaccgtctggctcgaggcgctgacccacggcagcttcaacggcgccggcccgggc
ggggcgagcgattaccagcggctcgaattcctcggtgaccgcgtgctcggcctcgcggtt
gccagctggctgttccgcgcgggcgacgggccggaaggcaagctctcccagcgcctcaac
gcgctcgtcagcggctcgacttgcgcgcgcattgcccgcgtgatcggccttcccgagcac
atccgcctcggcaagcaggcgcgtgatgatggcggggcggatagcgacaatatcctcggc
gatgtgatggaggcgctgatcggcgcgtgcttcatcgaacaggggttcgatgcggcgcag
gcgatcatctaccgcctgtgggcgcaggagcttgagggcgatgtcggcaaggccaagcat
cccaagagcgcgctgcaggaatgggctgcgggcaaccgccgtgcagggccggtctacgag
gtcgtggaccgcagcgggccggaccatgcggcgcgcttcaccgtgcgggtatcgatccgc
aatgtcggatcggcagaggccaccgcgaccagcaagagcgaggccgaaaagctcgccgcc
aaggctttcctcgaacgcttcggctga

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