Porphyrobacter sp. LM 6: BG023_111932
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Entry
BG023_111932 CDS
T04468
Name
(GenBank) molecular chaperone DnaK
KO
K04043
molecular chaperone DnaK
Organism
porl
Porphyrobacter sp. LM 6
Pathway
porl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BG023_111932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porl03019
]
BG023_111932
03110 Chaperones and folding catalysts [BR:
porl03110
]
BG023_111932
03029 Mitochondrial biogenesis [BR:
porl03029
]
BG023_111932
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
porl04147
]
BG023_111932
Messenger RNA biogenesis [BR:
porl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BG023_111932
Chaperones and folding catalysts [BR:
porl03110
]
Heat shock proteins
HSP70 / DNAK
BG023_111932
Mitochondrial biogenesis [BR:
porl03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
BG023_111932
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
BG023_111932
Exosome [BR:
porl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BG023_111932
Exosomal proteins of breast cancer cells
BG023_111932
Exosomal proteins of colorectal cancer cells
BG023_111932
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FtsA
FGGY_C
DUF6244
Motif
Other DBs
NCBI-ProteinID:
AOL94850
LinkDB
All DBs
Position
1984188..1986110
Genome browser
AA seq
640 aa
AA seq
DB search
MGKVIGIDLGTTNSCVAVMDGGKPKVIENSEGARTTPSIVAFTKDGQRLIGQPAKRQAVT
NPDNTLFAIKRLIGRRFDDPLTKKDMELVPYKITKGKNGDAWVNAGGEDYSPSQVSAFIL
QKMKETAESYLGETVTQAVITVPAYFNDAQRQATKDAGQIAGLEVLRIINEPTAAALAYG
MDKDDGKTIAVYDLGGGTFDVSILEIGDGVFEVKSTNGDTFLGGEDFDNAIVEFLADSFK
KKEAMDLKTDKLALQRLKEAAEKAKIELSSAASTEINLPFITARMEGGSTTPLHLVETIT
RADLEKMVDGLIQRTLDPCKKALADAGITKDQVDEVILVGGMTRMPRVREVVEQFFGAKP
HTGVNPDEVVAMGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRMIDRNTTIPTK
KTQTYSTAEDNQNAVTIKVYQGEREMAADNKLLGNFDLIGIPPAPRGVPQIEVTFDIDAN
GIVSVAAKDKGTGKEQTIKIQASGGLSDADIDQMVKDAEKFAEEDKKRRAAAEARNQADS
LVHATEKQLEEHGAKIDAATKTEVEEAIAAVKTALEGGDADDINAKAQALTQSAMKMGQQ
IYEAQQAAGPEGEGEAAGEAAADEDVVDAEFSEVDEDKKG
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagtaatcggtatcgacctcggcaccaccaactcctgcgttgctgtcatggac
ggcggcaagcccaaggtgatcgagaattcggaaggcgcgcgcacgaccccttcgatcgtg
gccttcaccaaggatggccagcgcctgatcggccagccggccaagcgtcaggcggtcacc
aaccccgacaacaccctctttgcgatcaagcgcctgatcggccgccgcttcgatgatccg
ctgaccaagaaggacatggagctggtcccctacaagatcaccaagggcaagaacggtgac
gcgtgggtcaatgccggcggcgaagattacagcccgtcgcaggtttccgcgttcatcctt
cagaagatgaaggaaaccgccgagagctatctcggtgaaaccgtgacgcaggccgtcatc
accgtgccggcctacttcaacgacgcccagcgtcaggcaaccaaggatgcagggcaaatc
gccggccttgaagtgctgcgcatcatcaacgagccgaccgcggccgcgctcgcctacggg
atggacaaggacgatggcaagaccatcgccgtctatgaccttggcggcggcaccttcgac
gtgtcgatcctcgaaatcggcgacggcgtgttcgaagtgaagtcgaccaacggcgataca
ttcctcgggggtgaagacttcgacaacgcgattgtcgagttcctcgcggattccttcaag
aagaaggaagcgatggacctcaagaccgacaagcttgcgctccagcgcctgaaggaagcg
gctgagaaggccaagatcgagctgtcgagcgcggcctcgaccgaaatcaacctgcccttc
atcaccgcgcgtatggaaggcggcagcactaccccgctgcacctcgtggaaacgatcacc
cgcgccgacctcgaaaagatggtcgacggtctgatccagcgcacgctcgatccgtgcaag
aaggcgctggctgatgccggcatcacgaaggatcaggtcgacgaagtgatcctcgtcggc
gggatgacccgcatgccgcgcgtgcgcgaagttgtggagcagttcttcggggccaagccg
cacaccggcgtgaacccggacgaagtcgtggcgatgggcgctgccattcaggcgggcgtg
ctgcagggcgacgtcaaggacgtgctgctgctcgacgtgaccccgctgtcgctcggtatc
gagacgctgggcggcgtgttcacccgcatgatcgaccgcaacaccaccattccgaccaag
aagacccagacttactcgaccgccgaggacaaccagaacgcggtgacgatcaaggtctat
cagggcgagcgcgaaatggcggcggacaacaagctgctcggcaatttcgacctgatcggg
atcccgcccgcaccgcgcggcgtgccgcagatcgaagtgaccttcgacatcgacgccaac
ggcatcgtctcggtcgcggccaaggacaagggcaccggcaaggagcagacgatcaagatc
caggcatcgggcggtctgtcggatgccgacatcgaccagatggtcaaggatgccgaaaag
ttcgctgaggaagacaagaagcgccgggcggccgcggaagcgcgcaaccaggctgacagc
cttgtccacgcgaccgaaaagcagctcgaagagcacggcgccaagatcgatgcggccacc
aagaccgaggtcgaggaagccatcgctgcggtcaagaccgcgctcgaaggcggcgatgcc
gatgacatcaacgccaaggcgcaggccctgacccagtcggcaatgaagatgggccagcag
atctacgaagcccagcaggccgccggccccgagggtgaaggtgaagctgccggtgaagct
gcggccgacgaagacgtcgtcgatgccgaattctccgaggttgacgaagacaagaagggc
taa
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