Porphyrobacter sp. LM 6: BG023_111935
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Entry
BG023_111935 CDS
T04468
Name
(GenBank) RadA/Sms DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
porl
Porphyrobacter sp. LM 6
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porl03400
]
BG023_111935
DNA repair and recombination proteins [BR:
porl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BG023_111935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_25
ATPase
DUF7125
DnaB_C
ChlI
AAA_16
Zn_ribbon_LapB
AAA
Lon_C
AAA_22
nSTAND_NTPase5
NACHT
AAA_30
GvpD_P-loop
nSTAND3
AAA_5
AAA_24
MCM
NTPase_1
RecA_N
Glyco_hydro2_C5
Zeta_toxin
ABC_tran
DAP3
KdpD
Motif
Other DBs
NCBI-ProteinID:
AOL94853
LinkDB
All DBs
Position
1989800..1991122
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AA seq
440 aa
AA seq
DB search
MSYRWQGQCADCGQWNTLIEDIPATVFSQKHDLSSGGRAVAFEPLNAPTQLPVRKSTGLA
EFDRALGGGLVPGSAVLLGGDPGIGKSTLLLQTAATIARGGNDVVYVSGEEAAGQVRLRA
SRMGVADAPIRLASETSVRDILTTLGQGDPPALLVIDSIQTMHSDTIEGAPGTVSQVRGC
ALELIRYAKESGCALVLVGHVTKDGTIAGPRVLEHMVDVVMSFEGERSHQYRILRALKNR
FGAVDEIGVFAMASEGLAEVANPSLLFLSGREAPLAGSAVFPALEGTRPVLVEIQALIVR
LQSGATPRRAVVGWDSGRLAMLLAVLESRCGLNFSSAEVYLNIAGGYRLTDPAADLAVAA
ALVSALADRPLPDKAAWFGEVSLAGEIRPVAHAPLRLKEAAKLGFDRCYGPAGAAEAAPG
TRYRGLEALANLVDQVMGSA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtaccgctggcaggggcaatgcgccgattgcgggcagtggaacacgctgatcgag
gatattccggcgacggttttttcgcagaagcatgatctttcgagtggcgggcgcgcggtc
gcgttcgagccgctcaatgccccgacacagctgccggtaaggaagtcgaccggccttgcc
gaattcgaccgtgcactgggcggcggcttggtaccgggaagcgccgtgctgctgggcgga
gacccggggatcggcaaatcgaccttactgctccagaccgcagcaaccatcgcgcgcggg
ggtaatgatgtggtctatgtcagcggtgaggaggccgccgggcaagtgcggctgcgcgcc
tcgcgcatgggggtggccgatgcgccgatccggctcgcctccgaaacctcggtgcgcgat
atcctgacgacgttggggcagggcgatcccccagcgttgctggtcatcgattcgatccag
acgatgcattccgacacgatcgaaggcgcacccggaaccgtcagccaggtgcgcggctgt
gcgcttgaactgatccgttacgccaaggaaagcggctgcgcgctggtgctggtcggccat
gtcaccaaggacggcacgatcgcggggccgcgtgtgctcgaacacatggtcgatgtcgtg
atgagcttcgagggcgagcgcagccatcagtatcgcatcctgcgcgcgctcaagaaccgc
ttcggtgcggtggacgagatcggggtgtttgcgatggcctccgaagggctggcggaagtc
gccaatccctcgctcttgttcctgtcgggccgcgaggcgccgctggccggtagtgcggtg
ttcccggcgcttgaaggcacccgaccggtgctggtcgagatccaggcgctgatcgtgcgg
ctgcaatcgggtgcaaccccgcgccgtgcggtggtgggttgggatagcgggcgcttggcg
atgctgctcgcggtgctcgaatcgcgttgcgggctcaatttctcctcggccgaagtctat
ctcaacattgccgggggatatcgcctgaccgatccggcggccgatctggcggtggccgcg
gcgctggtttcggcgctcgccgatcgccccctgcccgacaaggcggcatggtttggcgag
gttagtctggcgggggaaatccgccccgttgcccacgccccgctccgcttgaaagaggca
gccaagctggggtttgaccgctgctatggcccggcaggggcggccgaggcggcaccgggc
acgcggtatcgcgggctagaggcgcttgcaaacctcgttgaccaggtgatgggcagcgca
taa
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