Porphyrobacter sp. LM 6: BG023_111952
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Entry
BG023_111952 CDS
T04468
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6)
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
porl
Porphyrobacter sp. LM 6
Pathway
porl00550
Peptidoglycan biosynthesis
porl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BG023_111952
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
porl01002
]
BG023_111952
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
porl01011
]
BG023_111952
Enzymes [BR:
porl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BG023_111952
Peptidases and inhibitors [BR:
porl01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
BG023_111952
Peptidoglycan biosynthesis and degradation proteins [BR:
porl01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
BG023_111952
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
PBP5_C
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AOL94869
LinkDB
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Position
2007769..2008959
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AA seq
396 aa
AA seq
DB search
MLMVVRSFRFLVAALAGLALAFSVSGAARPLPPGFVLAGIPKPEEAPVALLVDLSSGQVL
HARNPDRRFMPASVTKVMSLYLAFELIEQGKLDPAQVFVMTPEVARDWRRKGSTMFLDRG
ERVRVDDLLLGIANVSANDGAAVLAAGQAGSIAGWTAKMNSTARGLGMTGSYFGTPNGWP
DEGRTFTTANDLVKLAQAMIARHPDRFGYYIGREGFDYKGIIQSNHDPMIGVVPGADGIK
TGFTNESGYSYLGTAQRQGQRLVLVLAGVDTGRLRARLARDYVEWGFGAFDRRRLFDPET
VIAGARVQNGDARHVPLVARGAVTINLPRGSNAKLKANVRYDGPLRAPLPAGRQVAVLEV
TGPGVTTAHIPLYTAEAVGEAGPIDRIVNAIAGVFS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgctgatggtggttcgctcatttcgatttctggtagcggcgctggcagggctggcgctg
gcgttttcggtttcaggagccgcacgcccgcttcccccgggcttcgtcttggcaggcatc
cccaagccggaggaggcgccggtcgccttgctcgtcgacctgtcgagcggtcaggtgctc
cacgcgcgcaatcccgaccggcggttcatgcccgcctcggtcaccaaggtgatgtcgctc
tacctagctttcgaactcattgagcagggcaagctcgatcccgcacaagttttcgtcatg
actcccgaagtggcgcgcgactggcggcgcaagggttcgaccatgttcctcgaccggggc
gagcgcgtgcgggtcgatgacctgctgctcggcatcgccaatgtctccgccaatgatggc
gccgcagtgctggcggcgggacaggcgggatcgatcgccggatggaccgcgaagatgaac
agcactgcccgcggtcttggcatgacgggaagctatttcggcactcccaacggctggccc
gatgaaggccgcaccttcaccaccgccaacgatctggtgaagctggcacaggcgatgatc
gctcggcatcctgaccggttcggctattacatcgggcgggaaggcttcgattacaaaggc
atcatccaatcgaaccatgatccgatgatcggggtggtgccgggggcggatggtatcaag
accggcttcaccaatgaatcgggatattcctatctcggcacggcacagaggcagggtcag
cggctggttcttgtgctcgcaggcgtcgacaccggaaggctgcgtgcacggctggcgcgc
gactatgtcgagtggggctttggtgccttcgaccggcggcgcctgttcgatccggagacc
gttattgccggggcgcgtgtgcaaaacggcgatgcgcgccatgtcccgctcgttgcccgc
ggcgcggtgaccatcaatctgccgcgcgggagcaatgccaagctcaaggccaatgtgcgc
tacgatggccccttgcgcgctcctttgcctgccggacgtcaggtcgctgttcttgaagtg
acagggccgggtgtgacgacggcgcatatcccgctctacactgcagaagcggtcggcgag
gctgggccgatcgaccggatcgtcaacgccatcgccggagttttctcgtga
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