Porphyrobacter sp. LM 6: BG023_111973
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Entry
BG023_111973 CDS
T04468
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
porl
Porphyrobacter sp. LM 6
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
porl03032
]
BG023_111973
03400 DNA repair and recombination proteins [BR:
porl03400
]
BG023_111973
Enzymes [BR:
porl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BG023_111973
DNA replication proteins [BR:
porl03032
]
Prokaryotic type
DNA Topoisomerases
BG023_111973
DNA repair and recombination proteins [BR:
porl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BG023_111973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AOL94890
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All DBs
Position
2029633..2032410
Genome browser
AA seq
925 aa
AA seq
DB search
MSDDTDIIDSPAPAPMGGFDRIDIVDEMKSSYLDYAMSVIVSRALPDVRDGLKPVHRRIL
FASQEGGFVAGKPYRKSAKIVGDVMGNYHPHGDAAIYDALARMTQPWSMRVPLIDGQGNF
GSMDPDPPASMRYTEARLARVANSLLDDLDKDTVDFTENYDGSRKEPTVLPARFPNLLVN
GAGGIAVGMATNVPPHNLGEVIDGCLAFIDNPHITSEELIQFIPGPDFPTAPLILGTHGA
RSAYTTGRGSVLMRCRHEIETGRNDRQSIVFTSIPYQVGKSNLVEKIAEAAKEKRIEGIS
DIRDESSREGVRVVIDLKRDATPDVVLNQIWRHTPAQSSFPANMLAIRGGRPETLTLRDI
IQSFIVFREEVITRRTKYELNKARERAHLLLGLVVAVSNLDEVVAMIRSARNPAEARSRL
LAKEWPIGDIAQYIRLVEAIDPSDDESGGTYRLSERQVKAILELRLHRLTALGRDEIGDE
LKELASAIEEFLSILADRVKLYGVMRTELEEIRATYATPRVSEIAPAWDGLEDEDLIERE
EMVVTVTHGGYIKRTSLATFRAQGRGGKGRSGMATKDEDAVVELFVTSTHNPVLFFTNTG
RVYRMKVWKLPEGGPQTKGRPMVNLLPLGEDERVTNVLPLPEDESSWANLNIVFATEQGM
VRRNSMDAFSNVPTAGKYAMGFVEGSGDRLIGVELLTEEQEIFLASDSGKAIRFAATDAR
ETKSRTGIGVRGMSLKKGGKVVSLAVLDPLTADMETREAYLRAAAWKNNDVAPTLPAEQV
ATMAEKEEFILTITANGYGKISSAYEYRTTGRGGQGITNIGTPESNPERNGPVVASFPVK
HGSQLMLVTDQAKLIRLAIDFRHLVEGGFENLKGFSISGRGSSGIRIFDVAKDEHIVGAA
LIDESADDDSGETESEIEGGEQPVT
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacgacaccgacatcatcgattcccccgcccctgccccgatgggcgggtttgac
cgtatcgacatcgtcgatgaaatgaagtcgagctatctcgactatgcgatgagcgtgatc
gtcagccgcgcgctgcccgatgtgcgcgatggtctcaagccggtgcaccgccgcatcctg
ttcgccagccaggaaggcggctttgtcgccggcaagccctaccgcaagagcgccaagatc
gtcggtgacgtgatgggtaactatcaccctcacggcgacgcggcgatctatgacgcactg
gcgcgcatgacgcagccgtggtcgatgcgtgtgccgctgatcgatggtcagggcaacttc
ggctcgatggaccccgatccgccggcctcgatgcgctacaccgaagcgcgtctggcgcgc
gtcgccaacagcctgctcgacgatctcgacaaggataccgtcgatttcaccgaaaactac
gacggcagccgcaaggagccgacggtgctgccggcgcgcttcccgaacctcctggtcaac
ggcgcaggcgggatcgcggtgggtatggcgaccaacgtgccgccccacaaccttggcgaa
gtgatcgatggctgcctggccttcatcgacaatccgcacatcacctcggaagagctgatc
cagttcattcccggccccgatttccccacggcgccgctgattctcggcacgcatggcgcg
cgttcggcctacaccaccggacgcggttccgtgttgatgcggtgccgtcacgagatcgag
actggccgcaatgaccggcagagcatcgtcttcacctcgatcccctatcaggtcggcaaa
tccaaccttgtcgagaagatcgccgaggctgccaaggaaaagcggatcgagggcatttcc
gacatccgcgacgaatcctcgcgcgaaggcgtgcgggtggtgatcgacctgaagcgcgat
gccacacccgatgtggtgctcaaccagatctggcgtcacacgcccgcgcagtcctccttc
ccggcgaatatgctggccatccgcggcgggcgccccgaaacgctgaccctgcgcgacatc
atccagagcttcatcgtcttccgcgaagaggtgatcacccgccgcaccaaatacgaactc
aacaaggcgcgtgaacgggcgcacctcttgctcggcctcgtggtcgcggtttcgaacctc
gatgaagtcgtggcgatgatccgcagcgcgcgcaatccggccgaggcgcgctcgcgcctg
ctcgccaaggaatggccaatcggggacattgcgcaatacatccgcctggtcgaagcgatc
gatccttccgatgacgagagcggcggaacttaccgcctgtccgaacggcaggtgaaggcg
atcctcgaactgcgtctgcaccgcctgaccgcgctgggccgcgatgaaatcggcgatgag
ctgaaggaactcgcctcggccatcgaggagtttctctcgatccttgccgaccgcgtgaag
ctctacggcgtgatgcgcaccgagctcgaggaaatccgcgccacctatgcaaccccgcgt
gtgtctgaaatagcgccggcgtgggacgggctggaagacgaggacctgatcgagcgcgag
gaaatggtcgtaaccgtcacccacggcggctacatcaagcgcacctcgctcgcgaccttc
cgtgcccagggccgcggcggcaagggccgctcaggcatggcgaccaaggacgaggatgcc
gtcgtcgaactgttcgtgaccagcacccacaatccggtgctgttcttcaccaacaccggc
cgcgtctaccgtatgaaggtgtggaagctgcccgagggcggaccacagaccaaggggcgc
ccgatggtcaacctcctgccactcggcgaggatgagcgcgtcaccaacgtgctgcccctg
cccgaggatgaatcctcgtgggcgaacctcaacatcgtcttcgccaccgaacaggggatg
gtgcgccgcaattcgatggatgccttcagcaacgtgcccaccgccggcaaatacgcgatg
ggcttcgtcgagggctcaggcgaccgtctgatcggggtcgagctgctgaccgaggagcag
gaaatcttcctcgccagcgacagcggcaaggcgatccgcttcgccgcgaccgacgcgcgc
gaaaccaagagccgcaccggtatcggtgtgcgcggcatgagcctcaagaagggcggcaag
gttgtcagcctagcggtgcttgatccgctcactgcggatatggaaacacgcgaggcttat
ctgcgcgcggcggcgtggaagaacaacgatgtcgcgccgaccctgccggccgagcaggtt
gccaccatggcggaaaaggaagaattcatcctcaccataaccgccaatggctatggcaag
atttcttcggcctatgaatatcgcaccaccggacgcgggggtcagggcattaccaacatc
ggcacgcccgaaagcaaccctgaacgcaatggcccggtggtcgccagcttcccggtcaag
cacggctcgcagctcatgctggtcaccgatcaggccaagctgatccgccttgccatcgat
ttccgccacctcgtcgaaggcgggttcgagaacctcaagggcttctcgatctccgggcgc
ggctcttcgggcatccgcatcttcgatgtcgccaaggacgagcacattgtcggcgcggcg
ctgatcgatgaaagcgcggacgacgatagcggcgagacggaaagcgagattgaaggcggc
gaacagccggtcacctga
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