Porphyrobacter sp. LM 6: BG023_112070
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Entry
BG023_112070 CDS
T04468
Name
(GenBank) 23S rRNA m(5)U-1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
porl
Porphyrobacter sp. LM 6
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
porl03009
]
BG023_112070
Enzymes [BR:
porl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BG023_112070
Ribosome biogenesis [BR:
porl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BG023_112070
SSDB
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Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
TRM5-TYW2_MTfase
MTS
Motif
Other DBs
NCBI-ProteinID:
AOL94986
LinkDB
All DBs
Position
complement(2130459..2131655)
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AA seq
398 aa
AA seq
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MTLTDPIIRLAAKGDGVTASGRHVSGAVPGDSVDEGGAVVSGPHHIAPACRHFGTCGGCL
LQHADDSVLAEFVRDRVLFAARGQGLEPESLLETHLSPPATRRRAGLHGLRTAKGAVLGY
REGGSHRIVDLAECPVLHPAITALIAPLRRFVGAHGPKGMVGIDLTLADQGVEANLVHFP
LDGLGPTEAALDLARDQGLARLTIDQGYGPETLWEPEPVTVTLAGVPVGLPPGAFLQATH
DAEAVMAADAAAWLEGTKVVADLFAGLGTFAFALRQDRKVLAVEAERAAHLACKIAGARA
GGTVLALHRDLFRSPLQPEELNRFDAVLLDPPRAGARAQVAEIAGSTLSRVVYVSCNPSS
WARDAATLAAAGFRLTKLRPVGQFRWSTHVELVSLFER
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtgacccttacagaccccatcatccgcctcgccgccaagggcgacggcgttaccgcatcc
ggccgccatgtctcgggcgctgttcccggtgacagcgtggacgagggcggcgcggttgtt
tccggcccgcaccacatcgcgcccgcctgccgccatttcggcacctgcggcggctgtctg
ttgcagcacgccgacgatagcgtgctggccgaattcgtgcgcgaccgcgtgctgttcgcc
gcgcgcgggcaggggcttgagcccgagagcctgctcgaaacccacctttcgccccccgcc
acccgccgccgggcgggccttcacgggttgcggacggccaagggcgcagtgctcggctat
cgcgagggcggatcgcaccgcattgtcgatctcgccgaatgtccggtgcttcatcccgct
atcacggcgttgatcgccccgctgcggcgcttcgttggcgcgcatgggccaaagggcatg
gtcgggatcgatctgacgcttgccgatcagggggtggaggcgaacctcgtccacttcccg
ctcgacgggctcggcccgaccgaggcggcgctcgatctcgcgcgtgaccaggggctggcg
cggctgaccatcgatcagggctatggccccgagaccctgtgggagcccgagccggtgacg
gtcactctcgcgggcgtgccggtcggcctgccgccgggcgcgttcctgcaagccacgcac
gatgccgaggcggtgatggctgccgatgccgccgcttggctcgaaggcactaaggttgtg
gcggatctgttcgcgggcctcggtaccttcgcctttgcgctgcggcaggatcgcaaggtg
cttgcggtcgaggccgagcgtgccgcgcatctcgcctgcaagatcgctggagcaagggcg
ggaggaaccgttctggcgctccaccgcgatctgttccgctcgccgctccagcctgaggaa
ctgaaccgcttcgatgccgtgctgctcgatccgccgcgcgccggtgcgcgtgcgcaggtg
gccgagattgcggggagcacgctgtcccgcgtggtctatgtcagctgtaacccgtcaagc
tgggcgcgcgatgcggcgacgctggcggcggcgggcttccggctgaccaagctacgcccg
gtcggccagttccgctggtcgacgcatgtcgagctggtaagcctgttcgagcgctag
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