Porphyrobacter sp. LM 6: BG023_112098
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Entry
BG023_112098 CDS
T04468
Name
(GenBank) putative (di)nucleoside polyphosphate hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
porl
Porphyrobacter sp. LM 6
Pathway
porl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BG023_112098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
porl03019
]
BG023_112098
Messenger RNA biogenesis [BR:
porl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
BG023_112098
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AOL95014
LinkDB
All DBs
Position
2160417..2160896
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AA seq
159 aa
AA seq
DB search
MSPEGLPYRPCAGFMLVNREGLVFVGQRIDPSAHGFWQMPQGGIDKGEDVRDAALRELQE
EIGVAAHLVEVIAQGSRPFLYDLPPELLGKVWKGKYRGQEQHWFLGRFLGEDADIDLEAH
DPPEFNEWRWIEPALLPELIVPFKRAVYEELVAEFAPLI
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgagccctgaaggcctgccctatcgcccctgcgcgggcttcatgctggtgaaccgcgaa
ggcctcgtctttgttggccagcggattgacccgagcgcgcacggcttctggcagatgcct
cagggcgggatcgacaagggcgaggacgtgcgcgatgccgccttgcgcgaattgcaggag
gaaatcggcgtcgccgctcaccttgtcgaggtgatcgcgcaaggatcacgcccgttcctc
tacgacctgccgcccgagctgctcggcaaggtgtggaagggcaagtatcgcgggcaggaa
cagcactggttcctcggccgcttcttgggcgaggatgcggatatcgaccttgaggcccac
gatccgcccgagttcaacgaatggcgctggatcgagcccgcgctgctgccggagctgatc
gtgcccttcaagcgggcggtttacgaagaactagtggcggaattcgcgccgctgatctga
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