Porphyrobacter sp. LM 6: BG023_112114
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Entry
BG023_112114 CDS
T04468
Name
(GenBank) succinate dehydrogenase subunit A
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
porl
Porphyrobacter sp. LM 6
Pathway
porl00020
Citrate cycle (TCA cycle)
porl00190
Oxidative phosphorylation
porl00650
Butanoate metabolism
porl00720
Other carbon fixation pathways
porl01100
Metabolic pathways
porl01110
Biosynthesis of secondary metabolites
porl01120
Microbial metabolism in diverse environments
porl01200
Carbon metabolism
Module
porl_M00009
Citrate cycle (TCA cycle, Krebs cycle)
porl_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
porl_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
BG023_112114
00650 Butanoate metabolism
BG023_112114
09102 Energy metabolism
00190 Oxidative phosphorylation
BG023_112114
00720 Other carbon fixation pathways
BG023_112114
Enzymes [BR:
porl01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
BG023_112114
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
DAO
Thi4
HI0933_like
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
AOL95030
LinkDB
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Position
complement(2174928..2176808)
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AA seq
626 aa
AA seq
DB search
MATSAQANGLGGTANGVGGAHLTGAYTIVDHTYDVVVVGAGGSGLRATMGAAEAGLRTAN
ISKVFPTRSHTVAAQGGIAASLGNNSPDHWTWHMYDTVKGSDWLGDQDAIEYLAREAPAA
VYELEHAGVPFSRNADGTIYQRPFGGHMQNMGAGPPVQRTCAAADRTGHAMLHALYQQSL
KYDADFFIEYFALDLIMVERDGVKQCVGVMAMCLDDGKIHRFRAQSVVLATGGYGRCYYT
ATSAHTCTGDGGGMVLRAGLPLQDMEFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGER
FMERYAPSAKDLASRDVVSRSMALEMREGRGVGPDGDHIYLHLDHIDPKVLAERLPGITE
SGKIFAGVDLTRQPLPVTPTVHYNMGGIPCNYHGQVVTLGPDGNPDTVIPGLYAVGEAAC
VSVHGANRLGSNSLIDLVVFGRATGHHLRDNLKPNAKQAELPADSADFALTRLDHFRYAS
GGSPTAQIRAEMQKAMQKHCAVFRDQKLMDEGVAKLAEQNKRMEDIHVTDKSLIWNSDLI
ETLELDNLMAQANVTMASAANRKESRGAHAHEDFPERNDKEWMKHTIAWFDGWGGRGSNI
RLDYRPVHEYTLTDDIKYIEPKARVY
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggctacgtcagcacaagccaatggtttggggggcaccgctaacggtgtcggcggcgcg
cacctgaccggcgcttacacgatcgtcgatcatacctatgacgtggtggtggtgggcgcg
ggcggatcgggcctgcgcgccacgatgggcgcggccgaagcgggcctgcgcaccgcaaac
atctcgaaggtcttcccgacgcgttcgcacactgtcgccgcgcagggcgggatagccgca
tcgctcggcaacaactcgcctgaccactggacctggcacatgtacgataccgtcaaggga
tcggactggttgggcgatcaggacgcgatcgaatatctcgcacgcgaggctccggcagcc
gtttacgaactcgagcacgcgggcgtgcccttcagccgcaacgccgatggcacgatctac
cagcgccccttcggcggccacatgcaaaacatgggcgctggcccgccggtgcaacgcacc
tgcgccgcggccgaccgtacggggcacgcgatgctccacgcgctgtatcagcagagcctg
aagtacgacgcggacttcttcatcgaatacttcgcgctcgacctcatcatggtcgagcgt
gacggggtgaagcagtgcgtcggcgtgatggcgatgtgccttgatgacggcaagatccac
cgcttccgcgcgcagtcggtcgttctggcgaccggcggctatggccgctgctactacacc
gcgacttcggcccacacctgcaccggcgacggtggcgggatggtgctgcgcgccggcctg
cctttgcaggacatggagttcgtccagttccacccgaccggcatctacggcgcgggcgtg
ctgatcaccgaaggcgcgcgcggcgagggcggctacctcaccaactcggaaggcgagcgc
ttcatggagcgctatgccccctcggccaaggacctcgcttcgcgcgacgtcgtgtcgcgt
tcgatggcgctcgaaatgcgcgaagggcgcggcgtggggccggatggcgaccacatctac
ctgcacctcgatcacatcgatcccaaggtgctggccgaacgcctgccgggcattaccgag
agcggcaagatcttcgcaggtgtcgatctcacccgccagccgctccccgtcaccccgacg
gtgcattacaacatgggcggcatcccctgtaactaccacgggcaggtcgtcaccctcggg
ccggacggcaatccggacaccgtcatccccggcctttatgccgtgggcgaggcggcctgc
gtgtcggtgcacggggccaaccgcctcggctcgaactcgctgatcgacctcgtggtgttc
ggccgtgcgaccgggcatcacctgcgcgacaatctgaagcccaacgccaagcaggccgaa
ctgcccgccgacagcgccgatttcgcgctgacccgtctggatcacttccgctacgccagc
ggcggctcgccgaccgcgcagatccgtgcggaaatgcagaaggcgatgcagaagcactgc
gccgtgttccgcgaccagaagctgatggacgaaggcgtggccaagctcgccgagcagaac
aagcggatggaggacatccacgtcaccgacaagtcgctgatctggaactcggacctcatc
gagacgctcgagctcgacaacctcatggcgcaggccaatgtgaccatggcgagcgcggcc
aaccgcaaggaaagccgcggcgcccacgcgcacgaggacttccccgagcgtaacgacaag
gaatggatgaagcacaccatcgcctggttcgacggctggggcggtcgcggcagcaacatc
cgcctcgattaccgtccggtccacgaatacacgctgaccgacgatatcaagtacatcgag
cccaaggcgcgggtatactga
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