KEGG   Porphyrobacter sp. LM 6: BG023_11219
Entry
BG023_11219       CDS       T04468                                 
Name
(GenBank) ATP-dependent helicase Lhr and Lhr-like helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
porl  Porphyrobacter sp. LM 6
Brite
KEGG Orthology (KO) [BR:porl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:porl03400]
    BG023_11219
Enzymes [BR:porl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BG023_11219
    5.6.2.6  RNA 3'-5' helicase
     BG023_11219
DNA repair and recombination proteins [BR:porl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BG023_11219
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AOL93176
LinkDB
Position
complement(212570..215038)
AA seq 822 aa
MVDVIPAATPLPPEIAAWFAQRGWRVRRHQLAMLEKAREGAHALLVADTGAGKTLAGFLP
TLCDFAGGAAPDEGLHTLYVSPLKALAQDVKRNLLGPVEEIGLPIRVETRSGDTPSDRKK
RQRERPPHILLTTPESLSLLLSYPESADLFAGLKRIVIDEVHSFATDKRGDLLALSLARL
HALAPGAQRVALSATLANPRDFQEWLAPQTGEAGEIAAAYLVIGEEGAEPEVEILLPQEE
RVPWGGHAGRWAVPQLYEAIKANRTTLVFTNTRFLAEFIFQCLWEANEDHLPIGIHHGSL
STEARRKVEEAMARGELRALVCTASLDLGIDWGDIDLVVQMGAPKGSSRLLQRIGRAGHR
LDVPSRAVLVPGNRFEFLEAMAAKQAVDEGQRDGEAFRPGSLDVLAQHVMACACAGPFHE
DALLAEVRSSLAYSWVDSATFQRVLGFVSNGGYALKAYDRFQRIVRDKLGVWRLAHPNQA
QRHRMNAGIIVDSEMLTVRFKNGRSLGKVEERFAASLSPGDTIFFAGMSLEVEGVKDMDV
VVRAAKKSATIPSYGGLRLPLTTHLSERVQGLLSDRAGWGRFPDDVREWLEMQDYRSRLP
APGELLVESFPHGGKHYTAYYTFEGWNANQSLGMLITRRMEERGLLPGGFVANDYCLAVW
GLKPVSDPAPLLSPDILTHEFTEWVTESHLLRRAFREVAVISGLVERQHPGQKKTGKQVT
FSTDLIYDVLRKYEPDHVLIEAAWADARARMTDVGRLADLLERSQRELVHVTLERVSPLA
VPVMTMIGREAVPQGAVDDELLLEAEGLIAAAMRPDGPLEGD
NT seq 2469 nt   +upstreamnt  +downstreamnt
atggtggacgtgatcccggccgccactcccctcccgcccgaaatcgccgcgtggtttgcg
cagcgcggctggcgggtgcggcggcatcagcttgcgatgctggaaaaggcgcgcgagggt
gcccacgcactgctcgtcgccgataccggtgctggcaagacgctcgcggggttcctgccg
acgctgtgcgacttcgctggcggggcggcgccggacgaagggctgcacacgctctacgtt
tcgccgctcaaggcgctggcgcaggatgtgaagcgcaacctgcttggtcctgtcgaggag
atcgggctgccgatcagggtcgagacccgcagcggcgataccccgtctgatcgcaagaag
cgccagcgtgaacgcccgccgcatatcctgctgaccacgccggaatcgctctcgctgctg
ctgtcctatcccgaaagcgcggatctgttcgcggggctgaagcgcatcgtgatcgacgag
gttcactccttcgccaccgacaagcgcggcgacctgctggcgctgagccttgcgcggctc
cacgcgctggcaccgggcgcgcagcgggtggcgctctcggcgacgctggcgaacccccgc
gacttccaggaatggctcgccccgcagaccggcgaggccggggaaatcgccgccgcctat
ctggtcatcggcgaggagggcgccgagcccgaggtcgagatcctcctgccgcaggaggag
cgcgtgccgtggggcggacacgccgggcgctgggccgtcccgcagctgtacgaggcgatc
aaggccaatcgcacgacgcttgtcttcaccaacacccgcttcctcgccgagttcatcttc
cagtgcctgtgggaggccaacgaggatcacctccccatcggcatccaccacggcagcctc
tccaccgaggcgcggcgcaaggtcgaggaggcgatggcgcggggggagctgcgcgcactg
gtgtgcaccgccagcctcgatctcgggatcgactggggcgacatcgatctggtggtgcag
atgggtgcacccaagggctcttcgcgcctgctccagcggatcgggcgcgcgggccaccgg
ctcgatgtgccgagccgtgcggtgctggtgccgggcaaccgcttcgaattcctcgaggcg
atggcggccaagcaggcggtggatgagggccagcgcgacggcgaggcgttccgccccggc
agcctcgatgtgctcgcccagcacgtgatggcctgcgcctgtgcggggccgttccacgag
gacgcgctgctcgccgaagtgcgttcgagcctcgcctatagctgggtcgattccgcgacc
ttccagcgggtgctggggttcgtgtccaacggcggctatgcgctcaaggcctatgaccgg
ttccagcggattgtccgtgacaaattaggggtctggcggctcgcgcaccccaatcaggcg
cagcgccaccggatgaatgccgggatcatcgtcgatagcgagatgctcacggtgcgcttc
aagaacggccgcagcttgggcaaggtcgaggagcgctttgcagcttcgctttcccccggc
gacaccatctttttcgcgggcatgagcctcgaggtcgagggcgtgaaggacatggatgtg
gtggtgcgcgcggcgaagaaaagcgcgacgatcccgagctatggcggcctgcgccttccg
ctgaccacccacctttccgagcgggtgcagggcctgctgtccgaccgcgcggggtggggg
cgtttccccgatgatgtgcgcgaatggctggagatgcaggactatcgctcgcgcctgcct
gcaccgggcgagctgctggtcgagagcttcccgcacgggggcaagcactacaccgcctat
tacaccttcgaagggtggaacgcgaaccagtcgctcgggatgctgattacccggcggatg
gaggagcgggggttgctgcccggtggtttcgtggcgaacgactattgcctcgcggtgtgg
ggattgaagccggtgagcgatcccgcaccgctgttatcgcccgatattctcacccacgaa
ttcaccgaatgggtcaccgaaagccacctgctgcgccgtgctttccgcgaggtggcggtg
atctcgggcctcgtcgagcgccagcatccggggcagaagaagaccggcaagcaggttacc
ttctcgaccgatctgatctacgacgtgctcaggaaatacgagcctgatcatgtgcttatc
gaagctgcctgggccgatgcgcgggcgcggatgaccgatgtcgggcggctcgccgacctg
ctcgaacggtcgcagcgggaactggtccacgtgacgcttgagcgggtctcgccgctggcc
gtgccggtgatgacgatgatcggccgcgaggcggtgccgcagggggcagtcgatgacgaa
ttgctgctcgaagccgaaggcctgatcgccgccgcgatgcgaccggatgggccgctggag
ggggactga

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