Porphyrobacter sp. LM 6: BG023_112211
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Entry
BG023_112211 CDS
T04468
Name
(GenBank) ATP-dependent DNA helicase, Rep family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
porl
Porphyrobacter sp. LM 6
Pathway
porl03420
Nucleotide excision repair
porl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BG023_112211
03430 Mismatch repair
BG023_112211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porl03400
]
BG023_112211
Enzymes [BR:
porl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BG023_112211
DNA repair and recombination proteins [BR:
porl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BG023_112211
MMR (mismatch excision repair)
Other MMR factors
BG023_112211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_11
Tudor_1_RapA
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AOL95126
UniProt:
A0A1D7NN64
LinkDB
All DBs
Position
2269440..2271749
Genome browser
AA seq
769 aa
AA seq
DB search
MSTNLPSSAPQAHDSVPAYAARLNPAQRAAVLATEGPVLMLAGAGTGKTAALTSRLAHLV
ATGRAYPSQILCVTFTNKAAKEMRERVAHHLGPQAEGLPWLGTFHSICAKMLRRHAELVG
LQHNYTIIDTDDQLRLLKQLIAEADLDEKRWPARQLAGLIDRWKNRGLNPGDLDAVENEA
YANGRGAALYGRYQERLKALNACDFGDLMLHMLNILRQHPDILADYQRRFRYIMVDEYQD
TNAVQYLWLRLLAQQHKNICVVGDDDQSIYSWRGAEVANILRFEKDFPGAEVIRLEQNYR
STPHILGAASGLIRANSQRHDKTLWTELNGGEKVKVIGVWDAPEEARRVGEAIERLEREG
APLDRIAILVRAQYQTREFEDRFIQIGIAYRIIGGFRFYERAEIRDALAYLRLIAQPQDD
LAFERIHNQPKRGLGAKALEQMHSHARRTGLPLAAAALQLADSDELPKRAAITIGGLMRQ
FLAWREAAETLTPANLLRLVLEESGYNAMLAGDRTPESAGRAENLSELARAMEEYETLGD
FLEHVSLVMDNDRANEGETVTIMTIHAAKGLEFDNVFCVGWEEGVFPTQRAIDEGGLASL
EEERRLAYVAITRARRHCTIIHAANRRIYGQWTSSIPSRFIEELPAEHIDQESTLSGGAS
LWRANWREQEDPFAHVARDYQSKAQTRGPGWQRALTSGYETKPARVRENTRSAASFAAPA
RSDVAIGAMVSHAKFGTGCVIDQEGNKLTILFEEVGEKRVLDSFVTVVG
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaacctgccctcttccgccccgcaggcgcatgactccgtccctgcctatgcg
gcgcggctcaatcccgcgcagcgggcggcggtgctggcgaccgaagggccggtgctgatg
ctggcaggggccggcacgggcaaaaccgcagcgctcacctcccgcctcgcccatctggtg
gcgaccggccgcgcctatccctcgcagatcctgtgtgtcaccttcaccaacaaggcggct
aaggaaatgcgtgagcgggtcgctcaccatctcggccctcaagccgaagggctgccgtgg
ctcggcaccttccattcgatctgcgccaagatgctgcgccgccatgccgaactggttggc
ctccagcacaattacaccatcatcgacacagacgatcagctgcggctgctgaagcagctc
atcgccgaggcggaccttgacgagaaacgctggcccgctcgtcagctggcgggtctgatc
gaccgctggaagaaccgcggactcaaccccggcgatctcgatgcggtcgagaacgaggcc
tatgccaatggtcgcggcgcggcgctgtacggacgctatcaggagcggttgaaggcactc
aacgcctgcgatttcggcgatctgatgctgcacatgctgaacatcctgcggcagcacccg
gacatcctcgccgattaccagcgccgcttccgctacatcatggtggacgagtatcaggac
accaacgcggtccagtatctttggctccgcctgctcgcacagcagcacaagaacatctgc
gtcgtcggcgacgatgaccagtcgatctattcgtggcgcggggccgaggtggccaatatc
ctgcgtttcgagaaggattttccgggcgcggaagtgatccggcttgagcagaactatcgc
tccactccgcatatccttggcgcggcatcaggcctgatccgcgccaattcgcagcgtcat
gacaagaccttatggaccgagctcaacggcggcgaaaaggtcaaggtcatcggcgtgtgg
gacgcgccagaggaagcgcgccgggtgggcgaagcgatcgagcggctcgaacgcgaaggc
gccccgctcgaccggatcgcgatcctcgtgcgtgcacagtatcagacccgcgaattcgaa
gaccgcttcatccagatcgggatcgcttaccgcatcatcggcggtttccgcttctacgag
cgcgccgaaatccgcgatgcgctggcctatctgcgcctgatcgcccagccacaggatgac
ctcgccttcgagcggatacacaaccagcccaagcgcgggcttggcgccaaggcgctggaa
cagatgcacagccacgcgcgccgcaccggcctgccgctcgctgccgcagcgctgcaactg
gctgacagcgacgaattgcccaagcgcgccgcgatcaccatcggcgggttgatgcggcag
ttcctcgcctggcgcgaggcagccgagacacttacccctgccaacctgctgcgcctcgtg
ctcgaggaatcgggctacaacgccatgcttgcgggcgaccgcacgcccgaaagcgcaggc
cgcgcggagaacctctccgaactcgcccgcgcgatggaggagtacgagaccctcggcgat
ttcctcgaacacgtcagcctggtcatggacaatgaccgcgccaacgagggtgagaccgtg
acgatcatgacgatccacgccgccaagggactggagttcgacaacgtgttctgcgtcggc
tgggaagaaggcgtgttccccacgcagcgcgcgatcgacgaaggcgggctcgccagcctc
gaagaggagcgccgcctagcctatgtcgccatcacccgcgcgcggcggcattgcaccatc
atccacgcagcaaaccgccggatctacggacagtggacaagctcgatcccctcgcgcttc
atcgaggagctgccggccgagcatatcgatcaggaaagcacgcttagcgggggcgcatcg
ctatggcgggcgaattggcgcgagcaggaagatcctttcgctcatgtcgcacgcgactac
cagtcgaaggcacaaacccgcggccccggctggcaacgcgccctgacctcgggatatgag
actaaaccggcccgtgtgcgcgagaacacacgctcggcggcgagcttcgctgcccctgcc
cgttcggacgtcgcaatcggtgcgatggtttcacacgccaaattcggaaccggctgcgtg
atcgatcaggagggcaacaagctcaccatcctgttcgaagaggtgggcgaaaagcgcgtc
ctcgatagcttcgtcaccgtggtgggataa
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