Porphyrobacter sp. LM 6: BG023_112406
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Entry
BG023_112406 CDS
T04468
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
porl
Porphyrobacter sp. LM 6
Pathway
porl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BG023_112406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porl03400
]
BG023_112406
Enzymes [BR:
porl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BG023_112406
DNA repair and recombination proteins [BR:
porl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BG023_112406
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
AAA_22
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AOL95318
LinkDB
All DBs
Position
2459573..2461738
Genome browser
AA seq
721 aa
AA seq
DB search
MNRIRLLVLNAALGPLDYRLPEGVDAPAGSVVIAPLGPRKVTGIVWDEGRLPGEEIAFER
LRPILEVLPVPPIPAPLRRLIEWTADYYCAALASVARMTLASGGALGGPAVMTEYRLSGG
IPERMTAQRLAAIEALEGEQGTMRELSGIAGVSEGVLRGLVNQGVIEPVTVNIDRPYPSA
DPDHDQPGLSPEQSAVAARLVAAVEARAFAPFLLDGVTGSGKTETYFEPVAEALRMGRQV
LVLLPEIALTENFLSRFAARFGAAPVLWHSSLKSTERRRAWRAIADGSAQVVVGARSALF
LPYDNLGLIVVDEAHEISFKQDDGVRYNARDVAVMRARFEGVPVVLASATPALESLHMAT
QGVYEKLDLPSRFGGASLPSVRLINLTQEKPGSQRWLAGPLIDALRDRLEKGEQSLLFLN
RRGYAPLTLCRNCGHRFKCPSCSAWLVEHRLSARLACHHCGFETRVPDACPECGESDCLV
ACGPGVERIAAEVAELFPEARVAVATSDTLNTPDRAAEFIAQAEGKAIDIIIGTQLVTKG
FHFPDLTLVGVVDADLGLEGGDLRAGERTFSQIAQVAGRAGRGAKPGEVLIQTRHPDAPV
IAALADGDRDGFYAAETAARRDANAPPFGRWAAIILSSEDEKEAREAAARLGDKRPRLPD
VQILGPAPAPLALLRGRYRYRFLVNAKRSANLQAALRDWIGAVQFAPGVRVGVDIDPYSF
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcatccgcctgcttgtcctcaacgccgcgctcggcccgctggattaccggctg
cccgagggagtggacgcgcctgcgggaagcgtggtgatcgccccgctggggccgcgcaag
gtgaccggcatcgtgtgggacgagggccgcctgccgggcgaggaaatcgccttcgagcgg
ctgcgcccgatccttgaagtgctgcccgtgccgccgatcccggccccgctgcgccgcctg
atcgaatggaccgccgactattactgcgcagccctcgccagcgttgcccgcatgacgctg
gcgagcggcggagccttgggcggcccggcggtgatgaccgaatatcgcctctcgggcggc
atccccgaacgcatgaccgcccagcgccttgccgcaatcgaggcgctcgagggcgaacag
ggcacgatgcgcgaactgtcggggatcgcgggcgtttccgaaggggtgctgcgcgggctc
gtcaatcagggggtaatcgagccggtgacggtcaacatcgatcgcccctacccgtccgcc
gatcccgatcacgaccagcccggcctctctcccgaacaatccgccgtcgccgcgcggctg
gtggcggcggttgaggcgcgcgcctttgcccccttcctgctcgacggggtgaccggttcg
ggcaagaccgaaacctatttcgagcctgtcgctgaagctctcaggatggggcgacaggtg
ctcgtcctgctcccagaaatcgcgttgaccgagaacttcctcagccgctttgccgcgcgc
ttcggggcggcgccggtgctgtggcattcctcattgaaatcgaccgagcgccgccgcgca
tggcgggcgattgccgatggttccgcgcaggtcgtggtcggcgcgcgttcggcgctgttc
ctgccctatgacaatctcgggctgatcgtggtcgatgaagcgcacgagatcagcttcaag
caggatgacggggtgcgctacaacgcccgcgacgtggcggtgatgcgcgcgcggttcgaa
ggcgtgccggtggtgctcgccagcgccacccccgcgcttgaaagcctgcacatggcgacg
cagggggtttacgagaagctcgacctgccgagccgtttcggcggggcgagcctgccgagc
gtgcggctcatcaaccttacgcaagaaaagccggggagccagcgctggctcgctgggccg
ctgatcgatgccctgcgcgaccggctggaaaagggcgagcaatcgctgctgttcctcaat
cgccgcggctatgcgccgctgacgctttgcaggaattgcgggcaccgcttcaaatgcccc
tcgtgcagcgcatggctggtcgagcatcgcctctccgcccgcctcgcctgccatcattgc
gggttcgaaacgcgagtgcccgatgcctgccccgaatgcggggagagcgattgtctggtg
gcctgcggccccggcgtggaacggatcgcggccgaagtcgccgagctgtttcccgaagcg
cgcgtggcggtggcaacctcggacaccctaaacacccccgaccgcgcggcggagttcatc
gcgcaggcggaaggcaaagccatcgacatcatcatcggcacgcagctggtgaccaagggc
ttccacttccccgatctcacgttggtgggcgtggtcgatgccgatctgggcctcgagggc
ggcgatctgcgcgcgggcgagcgcaccttctcgcaaatcgcgcaggtcgcgggccgtgcg
gggcgcggggccaagccgggcgaggtgctgatccagacccgccaccccgatgcccccgtg
atcgccgcgctggcggatggtgaccgcgacgggttctacgcagccgaaaccgccgcgcgc
cgcgatgccaatgctccgccgttcgggcgctgggcggcgatcatcctctcctccgaggac
gagaaggaagcgcgcgaggctgccgcacgattgggcgacaagcgcccgcgcctgcccgat
gtccagatcctcggccctgcccctgccccgctggcgctgctgcgcggacgctaccgctac
cgcttcctcgtcaacgccaagcgcagcgccaatctgcaagccgccttgcgcgactggatc
ggagctgtgcaattcgcccccggcgtaagggtgggcgtggatatcgatccctattccttc
gtctga
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