Porphyrobacter sp. LM 6: BG023_112513
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Entry
BG023_112513 CDS
T04468
Name
(GenBank) urea carboxylase
KO
K01941
urea/guanidine carboxylase [EC:
6.3.4.6
6.3.4.26
]
Organism
porl
Porphyrobacter sp. LM 6
Pathway
porl00220
Arginine biosynthesis
porl00791
Atrazine degradation
porl01100
Metabolic pathways
porl01110
Biosynthesis of secondary metabolites
porl01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
BG023_112513
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
BG023_112513
Enzymes [BR:
porl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
BG023_112513
6.3.4.26 guanidine carboxylase
BG023_112513
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Paralog
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
BSH_CusB
ATP-grasp_5
ATP-grasp
BSH_RND
BSH_YhbJ
RnfC_N
DUF2118
Motif
Other DBs
NCBI-ProteinID:
AOL95424
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Position
complement(2569542..2573135)
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AA seq
1197 aa
AA seq
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MSFDLPFDTVLIANRGAIAARIIRTCKRMGLKSVAVYSEADAGSLHVSAADAAVCIGPGP
AGQSYLDVDAIIAAARTTGAGAIHPGYGFLAENAEFAERCAAEGITFIGPTPDNIRTFGL
KHSARALASAHDLPLAPGTGLLRGEDEAAEAAVQIGYPVMLKATAGGGGIGMRVCEDEGG
LRDGFAAVVRQGEASFGDAGVFLERYVPRARHLEVQIFGDGQGRVMALGERDCSLQRRNQ
KVVEEAPAPCLPESKRAELIAAAVRLGEAAGYLSAGTVEFLYDAAREDFFFLEMNTRLQV
EHGVTEEVMGIDLVEWMIRGAGGDFAMLDAPAPVAKGHSVQVRLYAEDPALDYRPTTGTL
THVDFPDSLRAETWVMAGSEVSAFYDPMLAKLITHADTREAAIAAMQGALDAARIDGIET
NLRWLRDVVRHDGFTSGSVSTRLLDGIVHQPRSVRVIAGGTATSVQDFPGRLGLWNVGVP
PSGPMDDRSFRIGNLNLGNPEGTAGLEVTASGPTLLFEAPATICLTGADFGATIDGVPAP
RGEALHVAAGQTLAMGRVSGGGMRGYILFAGGLDVLPYLGSAATFTLGQFGGHGARALVA
GDVLHLGDGSVGAPAVLPLPSLAREWQIGVLYGPHGAPDFFTEGDIARFLEAEWQVHYNS
NRTGVRLVGPKPEWARRDGGEAGLHPSNIHDNPYAIGAVDFTGDMPIILGPDGPSLGGFV
CPFTVIAAERWKIGQLAPDDKVRFVPVGIAEAMAADAAGLVQHDLRHTGKEGKHSPILAQ
LPQQGSRPRTTYRQQGDRNILVEYGDIVLDIELRIRVHALMQTLEDMALPGVIDITPGIR
SLQLHFDGRVLDQPHALAALMDAEEAMGNLDDFAIPSRIVHLPLSWRDPAITETIAKYIG
TVRDDAPWCPDNIEFIRRINGLPDAQAVEDLIFDASYLVLGLGDVYLGAPVATPVDPRHR
LVTTKYNPARTWTPPNVVGIGGAYMCIYGMEGPGGYQLFGRTIQVWNTHRQTEAFTQGKP
WLLRFFDQIRFFPVSAEELTEWRRDFPHGRRAIRIEESTFRLADYRAFLKENAVSITAFE
ATRQAAFDGERAAWQASGEFDRVSDLLAADTGASDASAIEVPEGADVIEAPFGGSVWKLL
VAPGDIIAEGDVIAVIEAMKMECPFEAPASGTVAALYISEHQAVQPGAPMLALRRSA
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgatctccccttcgacacggttctgatcgccaatcgcggcgcgattgccgcg
cgcatcatccgcacgtgcaagcggatggggctgaagtcggtcgcggtctattccgaagcc
gatgccggttcgctccatgtcagcgcggcggatgcggcggtgtgcatcgggccggggccg
gcggggcagagctatcttgatgtcgatgcgatcatcgccgccgccaggacaaccggcgcg
ggcgcgatccaccccggatacggcttccttgccgagaatgccgagtttgccgagcgctgc
gcggcagagggcatcacctttatcgggccgacgcccgacaatatccgcaccttcggcctc
aagcattcggcccgcgcgctggcatcggcgcatgatcttccgctcgcgcccggtaccggg
ctgctgaggggcgaggacgaggctgccgaggctgccgtgcagatcggctatccggtgatg
ctcaaggcgaccgccgggggcgggggcatcggcatgcgcgtttgcgaggacgagggcggc
ttgcgcgacggctttgccgccgtagtccggcagggtgaggcgagcttcggcgatgcgggg
gtgttcctcgaacgctacgtgccgcgtgcgcgccatctggaagtgcagattttcggtgac
gggcagggccgcgtcatggcgctgggcgagcgcgactgttcgctccagcggcgcaaccag
aaggtggtcgaagaggcgcccgcgccctgtctgcccgagagcaagcgcgccgagctgatc
gccgccgctgtgcggctgggcgaggcggcgggctatctttccgccggcacggtcgagttc
ctctatgatgccgcgcgcgaggatttcttcttcctcgaaatgaacacccggcttcaggtc
gaacacggcgtcaccgaagaggtgatggggatcgacctcgtcgaatggatgatccgcggc
gcgggcggcgatttcgcgatgctcgatgctcccgcgccggtggccaaggggcacagcgtg
caggtgcggctctatgccgaggaccccgcgctcgattaccggcccaccacaggcacgctc
acccatgtcgatttcccggacagcctcagggccgagacatgggtgatggcggggagcgag
gtcagcgctttctacgatccgatgctggcgaagctcatcacccacgcggacacgcgcgaa
gcggcgattgcggcgatgcagggcgcgctggatgcggcgcggattgacgggatcgagacc
aacctgcgctggctacgcgacgtggtgcggcatgacgggtttacgagcggttcggtctcc
acgcggctgctcgatggcatcgtgcatcagcctcgcagcgtgcgggtgatcgcgggcggc
acggcgacttcggtgcaggatttccccggtcggttgggcctgtggaatgtcggtgtgccg
ccttcggggccgatggatgaccgctcgttccggatcggcaatctgaacctcggcaatccc
gaaggcacggcggggctggaagtcaccgccagcggcccgacgctgctgttcgaggcgccg
gcgacgatctgtctgacgggcgcggatttcggcgcgacgattgacggcgtgcctgcgccg
cgcggggaagcgctgcatgtggcggccgggcagacgctcgcgatggggcgggtgagcggc
ggggggatgcgcggctatatcctgtttgcgggcgggctggatgtgctgccctatctcggc
tcggcggcaaccttcacgctcggccagttcggcgggcacggcgcgcgggcgctggtggcg
ggtgatgtgctgcatctgggcgacgggtcggtcggcgctccggcggtgctgccgcttccg
tcgctggcgcgcgaatggcagatcggtgtgctctatggcccgcacggcgcgcccgatttc
ttcaccgagggcgatattgcgcgcttcctcgaggccgaatggcaggtgcattacaattcc
aaccgcaccggggtgcggctcgtcggccccaagcccgaatgggcgcggcgcgatggcggg
gaggcggggctgcacccctcgaacatccacgacaatccctatgcgatcggcgcggtcgat
ttcaccggggacatgccgatcattctggggccggacgggccgtcgctcggcgggttcgtg
tgtcccttcacggtgatcgcggcggagcggtggaagatcggtcagctcgcgccggacgac
aaagttcgctttgttcctgtaggtattgccgaagcgatggcggcggacgcggcgggcctc
gtccaacatgacctgcgtcacacgggcaaagaaggcaaacatagccccatcctcgcccag
ctcccccaacaaggctcaaggccccgcaccacctaccgccaacagggcgaccgcaacatc
ctggtcgaatacggcgacatcgtcctcgacatagaactccgcatccgcgtccacgccctg
atgcagacgctcgaggatatggcgctgccgggcgtgatcgacatcactcccggcatccgc
tcgctgcaattgcacttcgatggccgcgtcctcgatcaaccgcacgcgcttgcggctttg
atggacgccgaagaagcgatgggtaaccttgatgacttcgccatcccctcccgtatcgtc
cacctgcccttgagctggcgcgatccggcgatcaccgagactatcgccaaatacatcggc
accgtgcgcgatgatgccccgtggtgccccgacaacatcgagttcatccgccgcatcaac
ggcctgcccgacgcgcaagccgtagaggacctgatcttcgacgcgagctacctcgtgctc
ggcctcggcgatgtctacctcggtgcgccggtcgccacaccggtcgatccacgccaccgg
cttgtaaccaccaagtacaatccggcccgcacctggacgccgcccaatgtcgtcgggatc
ggcggggcctatatgtgcatctacgggatggaagggccgggcggataccagctgttcgga
cgcacgatccaggtgtggaatactcaccgccagaccgaggccttcacgcaaggcaagccg
tggcttctgcggttcttcgaccagatccgcttcttcccggtctcggcggaagaactcacc
gaatggcggcgcgattttccgcatggacggcgcgcaatccggatcgaggaaagcaccttc
cgcctcgccgattaccgtgccttcctgaaagagaatgccgtcagcatcaccgcattcgaa
gcaacccggcaggccgcctttgatggcgaacgtgccgcttggcaggcgagcggggagttc
gaccgggtcagcgatctgctcgccgccgataccggggcaagcgacgcatcggcgatcgag
gtgcccgaaggcgccgacgtgatcgaggcgccgttcggcggatcggtttggaagctgctg
gtcgcccccggcgacatcattgccgagggcgatgtgattgcggtgatcgaggcgatgaaa
atggaatgtccgtttgaagccccggcaagcggcacagtcgccgcgctctacatctccgag
catcaggcggtgcagcctggcgcgccgatgctcgcgctgaggaggagtgcatga
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