Porphyrobacter sp. LM 6: BG023_112548
Help
Entry
BG023_112548 CDS
T04468
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
porl
Porphyrobacter sp. LM 6
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TEN_YD-shell
RHS_repeat
Motif
Other DBs
NCBI-ProteinID:
AOL95459
LinkDB
All DBs
Position
2609992..2613081
Genome browser
AA seq
1029 aa
AA seq
DB search
MTQKAKPGTFLADIISTATFPASCTNQVTCNKPTATTNAGAETTNYTYDPTHGGVTLVQG
PPDQNNNRAETRVAYVARVAKMMTPSNVLVDQPTSIVVPSNIRTCRTQAQCTGTANEGNT
DIAYDANISPNLNPVAVTTRAGDNSLAASTNYTYSQLGRVATINGPLPGSDDATVYRYDV
AGQVTGVISPDPDGAGSLPRLATRTTYNNNGQVTLVENGQIPGTNPADWNSFSARTRLAN
TYDNFDRLASSSQISTDGATRYSITQYSYDAAGRLDCTAVRMNLTSVAASLPSDVCVKMT
PGADGEDRITRRYYDTADRATQVWSAVDTGIAQQTAEMAYNANGTVAWVEDANNNRTAYV
YDGHDRTRRINYPSPTTPGVANTGDYEEITYDAASNVSQFRTRRGETILLAYDNRRLLTQ
KTIPERAGLDPVHTRDVTYKYDLYGSLTEAAFDTSNRIVMTYDSLGRPVTSTQIMDGVSR
PLSYLYDIAGRQTRITHPDGAWWGYEYDTAGRLARIRDDDGIELITNVYDTWGRLERTNR
DSSAPDSLMFYDNANRLDRIFIDHPSSSYDVNRTYNHNQANQAKSEATDNQLYVWNAQPA
GTLDTPYVPDGVNQYDSVNGVTYAHDVNGNLTSDGATTYTYDVENRLVSASGAKTAGLRY
DPLGRLYQITDGSGSITRLLYDGDALVGEFNTSGTMLNRYVHALGAGDDPMIRYAGSNAA
RSAAEYLYADRLGSIVASFDWSGGVKAINTYDEFGVPGTPGGTANTGRFRYTGQIWIPEL
GQYHYKARAYSPTLGRFMQTDPIGYADGLNMYAYVGNDPVNRFDPTGLAATVPDACAGGP
GICVKPKENDCVGICVYPGDPRLDDLLPGFLPAITPDFGGGEGGGNLILVTAQRPQSGEL
ADRCLGRATSFGGSPGYKATVALDAVSAKFLQHQSSFRGDSTDPQSYWASSFGLGDLELN
IARSRFHGAVPTGRGAIRVTFDTGERVGYDGRNGFAPTTYLTIIFAAPIGRDPETGLPIR
PFQTAYPGC
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcagaaagccaagccgggcacgttccttgcggacatcatctcgacggcgaccttc
ccggcgagctgcacgaatcaggtaacctgcaacaagccgaccgcgacaaccaatgccggc
gctgagaccaccaactacacctatgaccccacccatggcggcgtgaccctcgttcaggga
ccgcctgatcagaacaataaccgcgccgagacgcgggtcgcatacgtggcgcgcgtggcg
aagatgatgaccccgtccaacgtcctcgtggatcaaccgacatcgattgtcgtgccgtcg
aacatcaggacctgccggacgcaggcgcagtgcaccgggactgcaaacgagggcaatacc
gacatcgcctatgacgcgaacatctcgcccaacctcaatcccgttgctgttaccacccgc
gccggcgacaacagcctcgccgcgtcgacgaactacacctactcccagctggggagagtg
gcgacgatcaatggcccacttccgggcagcgacgatgcgaccgtctaccgctacgatgtc
gccggtcaggtcacgggagtgatctcgcccgatcccgacggcgctggttctttgccgcgc
ctcgccacgcgcacgacctacaacaacaacggccaggtgacgctggtcgagaacggtcag
atcccgggcaccaacccggccgactggaacagcttttctgcccgcaccagattggcgaac
acctacgacaatttcgaccggctcgcgtccagcagccagatctcgaccgatggtgcaaca
cgatattcgatcacgcagtacagctacgacgcagctggacggctcgattgcaccgctgtc
cgcatgaacctgaccagcgtcgctgcgtctctgccgtcagatgtctgcgtgaaaatgact
cccggcgctgacggcgaggaccggatcacgcgccgctattacgacacggcagacagggcc
acgcaggtgtggtcggctgtcgataccgggatcgcccagcaaaccgccgagatggcctac
aacgccaacgggacggtcgcctgggtcgaggatgccaacaacaaccgcacggcctatgtc
tatgacgggcatgatcggacgcggcggatcaactatccctcgccaacgacccctggcgtc
gccaacacgggcgactacgaggagatcacctatgatgcggcaagcaacgtctcgcagttc
cgcacgcggcgtggtgagacgatcctgctcgcctatgacaaccgtcggctgctaacccag
aaaacgattcccgaacgtgctgggctcgacccggtccacacccgcgacgtgacctacaag
tatgacctctacggatcgctgaccgaagctgcgttcgatacctcgaaccgcatcgtgatg
acttacgattcgctcgggcgtccggtcaccagcacgcagataatggatggtgtatcgcgg
ccgctctcctacctctacgatattgccggacggcagacccggatcacgcatcctgacggc
gcgtggtggggctatgagtacgataccgcgggccgcctcgcccgtatccgcgatgatgac
gggatcgaactaatcaccaatgtctatgacacctgggggcggctcgaacggacgaaccgc
gacagcagcgcgcccgatagcctgatgttctacgacaacgcgaaccggctcgaccgcatc
ttcatcgaccaccccagcagcagctacgatgtcaatcggacctataaccacaaccaggcc
aatcaggcgaagagcgaggcgaccgacaaccagctctatgtctggaatgcccagccagca
ggcactctcgacaccccctatgtgcccgatggtgtgaaccagtacgacagcgtcaacggc
gtgacctatgcccacgatgtcaatggcaacctgacctcggatggagccaccacctacacc
tatgatgtcgaaaaccgtcttgtcagcgcctccggtgccaagacggcaggccttcgctat
gatccgctgggccgactctaccagatcaccgatggatctggcagcatcacccgtttgctg
tatgatggcgacgcgctggtcggcgagttcaacaccagcggtacaatgttgaatcgctat
gttcacgcgcttggcgcgggagacgatccgatgatccgctatgcaggatcaaatgctgcc
cgcagtgccgccgagtatctctatgcggatcggttgggatcgatcgtggccagcttcgac
tggagcggcggagtcaaggcgatcaacacctatgacgagttcggtgtgcccggcactccc
ggaggcaccgcgaacaccggacggttccgctacaccgggcagatctggatcccggaattg
ggccagtatcactacaaggcgcgagcttactcacccacgctcggacggttcatgcaaacc
gatccgatcggatatgccgacggcctcaacatgtacgcctacgtcgggaacgatccggta
aaccggtttgatccgaccgggcttgcagcaacggtgcctgatgcctgcgctggtggaccc
ggaatctgcgtaaagccgaaagaaaacgactgtgtgggtatctgtgtctatcctggtgat
cctcgacttgatgatttgcttcccggtttcctcccagcaatcacaccagactttggtggc
ggtgagggtggaggcaatctaattttggtaacggctcaaaggccgcaaagtggagagctc
gccgatcggtgcttagggcgtgccacttcttttggcggatccccaggatataaggcgact
gtggcccttgatgcggtgtcagccaaattcttacagcatcagtcgtcgtttaggggagac
agtaccgatccacaaagctattgggcgtcgagctttggtcttggtgatttggaactcaat
atcgcgagatcacgctttcatggagctgtcccaaccgggagaggggctatacgggtcaca
ttcgataccggtgaacgcgtcggatatgacggaagaaatggatttgcgcccaccacctat
ttgacaataatctttgcggcgccgattgggcgtgatcctgagaccggccttcctattcgt
ccttttcaaactgcatatccaggatgttaa
DBGET
integrated database retrieval system
