Porphyrobacter sp. LM 6: BG023_11423
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Entry
BG023_11423 CDS
T04468
Name
(GenBank) DNA polymerase-3 subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
porl
Porphyrobacter sp. LM 6
Pathway
porl03030
DNA replication
porl03430
Mismatch repair
porl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BG023_11423
03430 Mismatch repair
BG023_11423
03440 Homologous recombination
BG023_11423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
porl03032
]
BG023_11423
03400 DNA repair and recombination proteins [BR:
porl03400
]
BG023_11423
Enzymes [BR:
porl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BG023_11423
DNA replication proteins [BR:
porl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BG023_11423
DNA repair and recombination proteins [BR:
porl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BG023_11423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
YppF
Motif
Other DBs
NCBI-ProteinID:
AOL93377
LinkDB
All DBs
Position
complement(410412..411125)
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AA seq
237 aa
AA seq
DB search
MREVIFDTETTGLDPKTGDRMVEIGCVEMIGRVETGRTFHAYFNPERDMPIEAERVHGLS
AAFLATKPRFAETVDELLDFLGDAPLVAHNAGFDFGFLNNELQLIGREAIAMERMVDTVA
IARKKHPGSKLSLDALCTRYGIDRSHRVKHGALLDAELLAQVYVELTGGRQIGLGLVGDD
AGAGPDSNVTTFTPNAPWHRPSGDRPRREPRPHVASAEELERHKAFIAGIDNAIWTR
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaagtgattttcgacactgaaaccaccggactcgatcccaagacgggggatcgg
atggtggaaatcggatgcgtcgaaatgatcggtcgggtcgaaacaggccgcacgttccac
gcctatttcaatcccgaacgcgatatgccgatcgaggcggagcgcgtgcacggcctcagc
gccgcattcctcgccaccaagccgcgctttgccgaaacagtcgacgaactgctcgacttt
ctgggcgatgccccgctggtcgcgcacaatgccgggttcgacttcggtttcctcaacaac
gagctgcaactgatcggccgcgaggcgatcgcgatggagcggatggtcgataccgtcgcc
atcgcgcgcaagaagcatccgggctccaagctcagcctcgatgcgctgtgcacccgctac
gggatcgatcgcagccaccgggtcaagcacggcgcgctgctcgatgccgaactgctcgcg
caggtctatgtcgaactgacgggcggtcggcagatcggactggggctggtcggcgacgat
gccggcgccgggcctgacagcaacgtcaccaccttcacacccaatgccccgtggcatcgc
ccgtcaggcgatcgtccacggcgcgaacctcgcccccatgttgccagcgcggaggagctg
gaacgccacaaagcctttattgccggaatcgataacgcgatctggacccgctga
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