Porphyrobacter sp. LM 6: BG023_11485
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Entry
BG023_11485 CDS
T04468
Name
(GenBank) Ca2+-binding protein, RTX toxin-related
Organism
porl
Porphyrobacter sp. LM 6
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Motif
Pfam:
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
AOL93439
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All DBs
Position
470967..476240
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AA seq
1757 aa
AA seq
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MPTINGTTGNDVLPGTQADDTINGGAGNDTIVDRYGDDVIDGGDGDDVIVDEGGSNTIRG
GNGNDRITFSDVYSLPGSTIGNPARTNLIEGGAGNDFVTVGRLTRGALTVDLGEGDDILR
ITSLIPDIAVFRLGAGRDTVLLTYDFGDTVRANLGILTIADFTAGDAGDILNLGEMVRGL
FSSPSVFAAFDGANPFANGVLRLVQDGADTLIQLDYDGSKSNITAPFTIIRLENVVATSL
TAANFSGLNPAGGAPALPTVGGTAGDDLIFGPSSGAIINGGDGRDEIIGGFRADEINGGS
GNDIIDGGAGADVLRGGDGDDTITDQWGNDTIEGGIGNDRILIYRPGISGVDTVLNETVT
VNAGDGNDYVRLELDRRDFAPLTQRTLHGIVDLGAGDDVIELVAPSYNILLPTAQITLGT
GRDRVIVDTRAPQLGMSVTITDFAAGNSGDILEVAVPIGLAPAWNRVSNPFASGHLFLQQ
DGADTLVRFDYDGTGGGSGDGYHFTLVRLVGVTAASLTAANFNGYDPTGATSSFQIRAGT
SGNDELTGSFGNDLIEGGDGDDVITEVYGGSDTLRGGNGNDTIRVATLYSPTSDTVTISG
DAGNDLVDFSLSTTSGLTYAANIDLGIGDDRLILRSAPSGGMVITLGAGRDVIELAPGLA
GTSVGAITITDFQTGNSGDLLDWNLFAESDLSIDADTDFEGFVQEHMRLLQVGNDTHLQI
SEVGYSQQFVTLAVFQNTVATSFTAANLGFDPNHATLLGTAAGETLGGTANLDIIWAGEG
NDTINGLVGDDRLYGEAGTDIINGGDGNDFIRGGLGDDTLNGNDGDDTIDSGGGRDGVFG
GGGNDIIDDFGGIDDIDAGSGNDRVNVSLTFALTADGGGIAPGRVIAGDGNDVVTITDAF
LGTSNPPEGATPYSVDLGAGDDLLITDGHFGRITLGAGRDVVQFVEGVDSYGSVITDFAT
GATGDRIDLTGLLGFSIDVFDRTLIDLLRLGGNPFELGIYELRQVGSDVQLILSPSVSGD
YVEQLVMTFQNTQVSAFTAENFSGFDPHAVPLVPRYIYENTTIGTGESLSLVNITPDGLV
LMGANSGFVYRAIDDSDFINNGSVTTIADRPGYGLPIGFGVSRSSAPGVDAWFVNSATGE
FIVAANFDDGSGIISFSATQAFGFYAPQQAVHFRNDGYFEVTSAIGSAFGVVTGFDTTTT
RQFVNNGTLIADGAYGGFAVELGFAASFLNTGAIAAFGLVEAVGVRWSQYGGGSFVNSGT
IFALNSLDSPFFSVGVLLIEVPDANVTPPRVIENSGIISADIAILSADGSPAGQVTNHVR
NTGLIEGAILLGFGNDAVFNNDGGEIRGAVLLEEGNDLYDGIGGTLVGSVRGGLGDDTYR
IDDAAIDIIENASEGTDTVEIGRDYTLRDNFEVLRLLGNDGFSGTGNTLDNQLFGNAAGN
RLTGLGGNDTINGGSNVDTAVVRGLRSAYTVTQTSTGVFQVVGPDGTDTLTAIEFLQFDD
QVLRLRPGTGVSVNFNTADPSVYQSAMNNIRDFDGNALGGNGSWLRIGSADVNGDGDVDQ
ILVNRTIGRFATIGTAPDGLVYFSDHSWAGETRVAGIYIDPLVASGQVVAGSANDSQRRF
QNDLQIENINRVLGASDYDRDGLQEVYFALTDGTAYLRAIMEADGNIRYANYQSQQEVIN
YLTANGFGPSTWAGWFPQPTSGEASLIGEDDASLVKGDPGSDTLGTGALDAGLAGTPHSF
HPMFTIPTEVLAPEFYG
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccatcaacggaaccaccggcaacgacgtgctgcccggcacccaggcggatgac
acgatcaacggcggggctggcaacgacaccatcgtcgatcgctatggcgatgacgtcatc
gacggcggtgatggcgacgatgtgatcgtcgacgagggtggcagcaacaccatccggggc
ggcaacggcaacgaccgcatcacattcagcgacgtctattcgctgcccggcagcaccatc
gggaacccggcgcgcaccaacctgatcgagggcggggcgggcaacgacttcgtcacggtt
ggccgcctgacgcgcggtgcgttgaccgtcgatctgggcgagggtgacgatattctgcgg
atcaccagcctgatccccgacattgcggtcttccggctcggcgcgggccgtgacacggtc
ctgctgacttatgactttggcgataccgtcagggccaatcttggcatcctgacgattgcc
gatttcaccgcgggcgatgcgggcgatatcctcaacctcggcgagatggtgcgcgggctg
ttcagcagtccttcggtattcgccgcctttgacggcgccaacccctttgccaatggcgtg
ctgcgcttggtgcaggacggcgcagatacgctgatccagctcgattacgatggctccaag
agcaacataactgcacccttcaccatcatccggctcgaaaacgtcgtcgccacatcgctc
acggctgcgaacttctccggcctcaatccggctggcggcgcgcccgcgctgccgacggtt
ggtggcacggctggcgacgatctgatcttcggcccgtcatcgggcgcgatcatcaacggc
ggtgatggccgggacgagatcatcggcggcttccgcgccgacgagatcaatggcggcagc
ggcaatgacatcatcgatggcggtgcgggggccgacgtgctgcgcggcggtgatggcgac
gacacgattaccgaccaatggggcaatgacaccattgaaggcggcatcggcaatgaccgc
atcctgatttaccgcccgggtatctccggggtcgacacggtgctcaacgaaaccgtgacg
gtcaatgccggcgacggcaacgactatgtccgcctcgaactcgaccgccgcgatttcgct
ccgctcacccagcgcacgcttcacgggatcgtcgatctcggcgcgggcgatgacgtgatc
gaactcgtggcgccgagctacaatatcctgttgccgacggcgcagatcactctcggcacc
gggcgcgaccgcgtgattgtggacacccgcgcaccgcaactgggaatgtcggtcacgatc
accgattttgctgcgggcaacagcggcgatattctcgaagttgcggtgccgatcggcctt
gccccggcgtggaaccgggtcagcaacccctttgccagcggacacctgttcctccagcag
gacggcgcggacacgctggtgcggttcgactatgacggtaccggcggcggcagcggtgat
ggctatcacttcacgctggtgcggctcgtcggcgtcaccgcagcgagcctgacggcggcg
aacttcaacggctacgaccccaccggcgcgacctcgtccttccagatccgcgcgggcact
tcgggcaatgacgaactgactggctcgttcggcaatgacctgatcgagggcggggacggc
gatgacgtcatcaccgaggtctatggcggctccgatacgctgcgcggcggcaacggcaac
gacaccatccgcgtggcgacgctctattcgcccacgtccgatacggtgacgatcagcggc
gatgccggcaatgatctggtcgatttcagcctcagcacgacctcagggctcacctatgcc
gccaatatcgatctcggcatcggcgatgatcggctgatcctgcgctcagccccaagcggc
gggatggtgatcacgttgggggcggggcgcgatgtgatcgagcttgcgccgggccttgcc
ggcacttcggttggtgccatcaccattaccgacttccagaccggaaatagcggcgatctg
ctcgactggaacctgtttgccgaaagcgatctgtcgatcgacgcggacaccgatttcgag
ggcttcgtgcaggagcatatgcggctgctgcaggtcggcaacgacacccacttgcagata
tccgaagtcggctacagccagcagttcgtgacgctcgcggtgttccagaacaccgtggcg
accagctttactgcggccaatctcggcttcgatcccaaccatgcaacattgctcggcacg
gcggcgggagaaacgcttggcggcaccgccaatctcgacatcatctgggctggcgagggc
aatgacacgatcaacgggctggtcggcgatgatcgcctctatggcgaagcgggcactgac
atcatcaacggcggcgacggaaatgatttcattcgcggcgggcttggtgacgacacgctg
aacgggaacgatggtgacgatacgatcgactccggtggcgggcgcgatggcgtgttcggc
ggcggcggaaatgacatcatcgacgattttggcgggattgacgatatcgatgcaggttcg
ggtaacgaccgcgtcaacgtcagtctgactttcgcattgaccgccgatggtggcggcatt
gcacccggcagagtcatcgctggcgatggcaatgatgtggtcaccataaccgatgcattt
ttggggacgagcaacccgccggaaggcgcgaccccctattcggtcgatctcggcgcgggg
gacgatcttctgatcactgacgggcatttcgggcggatcacgctcggcgccggacgcgat
gtggtccagtttgtcgaaggcgtcgacagctacgggtcggtcatcaccgacttcgcaacc
ggagcgacaggggaccggatcgatctcaccggattgctcggcttttcgatcgacgttttc
gaccgcaccttgatcgacctgcttcggctcggcggcaatccgtttgagctaggcatctac
gagctgcgtcaggtcggcagtgacgtgcagctgatcctgagcccgtcagtcagcggcgat
tatgtcgaacagctggtgatgaccttccagaacacgcaggtctctgccttcacggccgag
aatttctccggcttcgatccgcacgctgtcccgctcgtcccgcgctacatttacgagaac
accaccatcggcaccggcgagtcgctgtcgctcgtcaacatcacccccgacgggctggtg
ttgatgggcgcgaatagcggtttcgtttaccgcgcaatcgacgattctgatttcatcaac
aatggcagcgtcaccaccatcgccgaccgacccggatacggcctgccgatcgggttcggg
gtgagccggagctccgcccccggcgtggatgcatggttcgtcaacagcgcgaccggcgaa
ttcatcgtcgccgccaactttgatgacggttcgggcatcatctccttcagtgccacgcaa
gccttcggtttctacgccccgcagcaggcggtgcatttccgcaatgacggctatttcgag
gtcacttcggccatcggaagtgccttcggggtggtcaccggtttcgataccaccacgacg
cggcaattcgtcaacaacggcactttgatcgccgatggggcctatggcggctttgcagtc
gaactgggctttgccgccagcttccttaacaccggagctattgcggcattcggtctggtc
gaggcggttggcgtgcgttggagccagtatggcggcggcagctttgtcaactcgggaacg
atcttcgcgctcaacagcctcgattcgccgttcttcagtgtcggagtgctgctgatcgag
gtgcccgacgccaatgtcaccccgccgcgtgtgatcgaaaacagcgggatcatctccgcc
gacatcgcgatcctctcggccgacggcagcccggcggggcaggtcaccaaccacgtccgc
aataccggtctgatcgaaggtgcgatcctgctcggcttcggcaatgacgcggtgttcaac
aatgacggcggcgaaatccgcggtgcggtgctgctcgaggaaggcaacgacctttacgat
ggcatcggcggtacgctggtcggcagtgtgcgcggcggtctgggcgatgacacctaccgc
attgacgatgctgcgatcgacatcatcgagaacgcgagcgaagggaccgacacggtcgag
atcgggcgcgactacacgctgcgcgacaatttcgaggttctgcgcctgctgggcaacgac
gggttctcgggaacgggcaacacactcgacaaccagctctttgggaatgcagccggcaac
cgcctgacgggccttggcggcaacgacacgatcaacggcggcagcaatgtggatacggcg
gtcgtgcgcggtctgcgctcggcctataccgtgacccagacctcgaccggcgtgttccag
gtggtggggccggacgggacggatacgctgaccgcgatcgagttcctgcagttcgacgat
caggtgcttcgcttgcggcccgggaccggagtgagcgtcaacttcaacactgccgatccc
tcggtataccagtcggcgatgaacaatatccgcgactttgacggcaatgcgctgggcggc
aatggctcgtggctgcggatcggttcggcggacgtgaacggggatggcgacgttgaccag
atcctcgtcaaccgcaccatcggacggttcgccaccatcggcacagcccccgatggcctc
gtctacttctcggatcacagctgggcgggcgagacgcgcgtggcggggatctatatcgat
ccgctggtcgcttcggggcaggtggttgcaggcagcgccaacgacagccagcgccggttc
cagaacgatctccagatcgagaacatcaaccgcgtgctgggtgccagcgactacgaccgc
gatggcttgcaggaggtctacttcgcgctgaccgacgggacggcctatctgcgcgcgatc
atggaggctgacggcaacatccgctacgccaactaccagtcgcagcaggaggtgatcaac
tacctcaccgccaacggctttggcccgtcgacctgggcaggctggttcccgcaacccacc
agcggcgaggcgagcctgatcggcgaggatgatgcgagcctcgtcaagggcgatcccgga
tcagacacgctcggcaccggcgcgctggacgcagggctggcgggcaccccccacagcttc
cacccgatgttcaccatcccgaccgaagtgctcgcccccgaattctacgggtaa
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