Porphyrobacter sp. LM 6: BG023_11620
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Entry
BG023_11620 CDS
T04468
Name
(GenBank) TonB-dependent outer membrane channel
KO
K02014
iron complex outermembrane recepter protein
Organism
porl
Porphyrobacter sp. LM 6
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
porl02000
]
BG023_11620
Transporters [BR:
porl02000
]
Other transporters
Pores ion channels [TC:
1
]
BG023_11620
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AOL93573
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Position
complement(612362..614689)
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AA seq
775 aa
AA seq
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MTIATPMRSPLRLGKLALLISAAALTPYAAAAQDAEVPAQEEAANTLDTINEILVTGTKT
KDAENVQDVPLAVTAFNAGTLEAFKIRDISGLSFQAPNVSLDQVGTSRGTANFSIRGLGI
NSSIPSIDPTVGVFVDGVYLGFNAGVVFDLFDLESVEVLRGPQGVLFGRNVTGGAVLINT
GNPTEDFRGKFRAAVDGPVDGGRGGANYTVSGVVSGPIIEDTLLFKVGAYYNKDEGYFRN
LFNGSNQGAAETKILRGALEARLGDLTLLGKLDYFESDGDGPAAQNRGFFDRNSYDLSID
NRGFYTNEIWTGSLTATMDIGAGTLTNVFGWRKYDAATDGDIDATPLFLFHSTTETAQEQ
FSNELRYAISTEDGLDLTFGTFWFDQNIAYTERRQLPLASPFTFYGGGAQDHEVLGVFAN
AQYELGSGVSIIAGVRWSQETKDAGVTYVRPRTPCSVVDGTCPTSGVNSLIPTENNGFTD
RVRFRNVSPKIGMQYEFSAGQLYGHWSRGFRSGGYNFRITNARAFEQIALAPGGTLAFDE
EEVNTVEIGGKFQTADGALTVNLAGYVTKIDNMQREVNQSSPTAGVAQSIFNTADATISG
FEAEARLRATDSLVLTANIGLIDAAYQRILFDISGNGTIDQGDLNLSLPRVPPLTVGAGL
VHELDLGNGNILTRVNYQYRDKAAYTDDNFGWLNDMNNLEVNVTWTTPIDGLSFSVYGRN
LLDEVQEGGDTQVPFGGPLSVGAANRMPFGANPAAGTFSPLLRGRNVGIEALFEF
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgctacccccatgcggagccccctccggctcggcaaactggcgctgcttatc
tcggctgccgctctgaccccctacgccgctgcggcgcaggatgctgaagtgccggctcag
gaagaagccgccaatacgctcgacaccatcaacgaaatcctcgtcaccgggaccaagacc
aaggatgccgagaatgtgcaggatgtgccgctggccgtcaccgcgttcaacgccggtacg
cttgaagccttcaagatccgtgacatctcgggtctgtcgttccaggcgcccaacgtcagc
ctcgatcaggtcggcaccagccgcggcaccgccaacttctcgatccgcggtctcggcatc
aactcgtcgatcccctcgatcgatccgaccgtgggcgtgttcgtcgacggcgtgtacctc
ggcttcaacgccggcgtcgtgttcgacctgttcgaccttgaaagcgtcgaagtactccgc
ggcccgcagggcgtgctgttcggccgcaacgtcaccggcggcgcggtgctgatcaacacc
ggcaacccgaccgaagacttccgcggcaagttccgcgcagcggttgacggacccgtggac
ggcggtcgcggcggcgcaaactacaccgtcagcggtgtggtttccggcccgatcatcgaa
gacaccctgctgttcaaggtcggcgcctattacaacaaggacgaaggctacttccgcaac
ctgttcaacggctcgaaccagggcgcggcggaaaccaagatcctgcgcggcgcactcgaa
gcgcgtctgggcgacctgaccctgctgggcaagctcgactacttcgaaagcgacggcgat
ggcccagcggcgcagaaccgcggcttcttcgatcgcaacagctacgatctctcgatcgac
aaccgcggcttctacaccaacgagatctggaccggctcgctcaccgcgaccatggatatc
ggcgcaggcacgctgaccaacgtgttcggctggcgcaagtacgatgcggccaccgatggc
gacatcgatgcgaccccgctgttcctgttccactcgaccaccgaaaccgctcaggagcag
ttctcgaacgagctgcgctatgcgatctcgaccgaggacgggcttgatctgaccttcggc
accttctggttcgaccagaacatcgcctacaccgagcgtcgccagctgccgctcgccagt
ccgttcaccttctacggcggcggtgcacaggatcacgaagtgctcggcgtgttcgccaac
gcgcagtacgaactgggttcgggcgtctcgatcatcgccggggtccgctggagccaggag
accaaggatgccggtgtgacctatgtccgtccgcgcactccctgttcggtggtcgatggc
acctgcccgacttcgggcgtcaacagcctgatcccgaccgagaacaacggcttcaccgac
cgcgtgcggttccgtaacgtttcgcccaagatcggcatgcaatacgaattcagcgccggc
cagctttatggtcactggagccgcggcttccgttcgggcggctacaacttccgcatcacc
aacgcccgtgccttcgaacagatcgcgctggcaccgggcggtacgctggccttcgacgaa
gaagaggtcaacactgtcgaaatcggcggcaagttccagactgccgatggcgcgttgacc
gtcaacctcgcgggctacgtgaccaagatcgacaacatgcagcgcgaagtgaaccagtcg
tcgccgacggcaggcgtggcgcagtcgatcttcaacacagccgacgcaaccatctccggc
ttcgaagccgaagcgcggctgcgggcgacggattcgctggtgctgaccgccaatatcggt
ctgatcgacgccgcctatcagcggatcctgttcgacatctccggcaatggcacgatcgat
cagggcgacctcaacctgagcctgccgcgcgtccccccgcttacggtgggcgctggtctg
gtgcacgaactggacctcggcaacggcaacatcctgacccgcgtgaactaccagtatcgt
gacaaggcggcctataccgacgacaacttcggctggctgaacgacatgaacaatctggaa
gtcaacgtgacctggacgaccccgatcgacgggctgtccttctcggtctacgggcgcaac
ctgctcgacgaagtccaagaaggcggcgacacgcaggtgccgttcggcggaccgctttcg
gtgggtgcggccaaccgcatgcccttcggcgcgaaccccgcagccggcaccttctcgccg
cttctgcgcggccgcaacgtcggtatcgaagcgttgttcgagttctaa
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