KEGG   Porphyrobacter sp. LM 6: BG023_11791
Entry
BG023_11791       CDS       T04468                                 
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
porl  Porphyrobacter sp. LM 6
Pathway
porl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:porl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BG023_11791
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:porl03400]
    BG023_11791
Enzymes [BR:porl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BG023_11791
DNA repair and recombination proteins [BR:porl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BG023_11791
    RecFOR pathway proteins
     BG023_11791
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 Mg_chelatase TIP49 AAA_22 AAA_2 AAA_14 ABC_tran AAA_17 AAA_33 nSTAND3 AAA_24 TsaE RNA_helicase Parvo_NS1 Rad17 AAA_18 PEPCK_ATP AAA_28
Other DBs
NCBI-ProteinID: AOL93740
UniProt: A0A1D7NIX6
LinkDB
Position
798980..800017
AA seq 345 aa
MTDSPLHSPARQPGDPDAALRPRRLAEFVGQEAAKGNLAVFIAAARARGEAMDHTLFFGP
PGLGKTTLAQIIAGELGVGFRATSGPVIAKAGDLAALLTNLEPHDVLFIDEIHRLSPMVE
EVLYPAMEDRALDLIIGEGPSARSVRIDLPPFTLIGATTRQGLLTTPLRDRFGIPVRLNF
YTHAELERVVTRAAGLLGLAIEPEGAREIARRSRGTPRVAGRLLRRVRDFADVAGSASVT
RTVADEALTRLEIDRLGLDLMDRRYLAMIATTYKGGPVGIETLAAGLAEPRDTIEDVVEP
YLIQLGLVARTARGRVLNDAGWEHLEMTPPKDSPPQQSGLFDDNG
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgactgactcccccctccactcccccgcccgccagccgggtgacccggacgcggccctg
cgcccgcgccggttggccgagttcgtcgggcaggaggcagccaaggggaaccttgcggtc
ttcatcgcggccgcccgcgcacgcggcgaggcgatggatcatacgctgttcttcggcccg
ccgggtctcggcaagaccacgctggcgcagatcatcgcgggcgagctgggtgtgggcttc
cgcgccacctccggccccgtcatcgccaaggcgggcgatctcgccgcgctgctgactaat
ctcgaaccgcatgacgtgctgttcatcgacgagatccaccgcctttcgccgatggtcgag
gaggtgctctatccggcgatggaagaccgcgcgctcgatctcatcatcggcgaggggccg
tcggcgcgctcggtgcggatcgacctgccgcctttcaccctgatcggcgcgaccacgcgg
cagggcctgctgaccacgccgctgcgtgaccgtttcggcattccggtgcggctcaatttc
tacacccacgccgaactggagcgggttgtgacccgcgctgccggcctgctcggcctcgcg
atcgagcccgagggcgcacgcgagatcgctcgccgttcccgcggcacgccccgcgttgcc
ggccgcttgctcaggcgggtgcgcgactttgccgatgtggcgggcagtgcttcggtcacc
cgcacggtcgcggacgaggcgctcacccggctcgagatcgaccggctcggcctcgatctg
atggatcgccgctacctcgcgatgatcgccaccacctacaagggcggccctgtcggcatc
gagacgctggcggcgggtcttgccgaaccgcgtgacacgatcgaggatgtggtcgagccc
tatctcatccagcttggccttgtcgcccgcaccgcgcgcgggcgtgtgctcaacgatgcg
ggttgggaacatctcgagatgaccccgcccaaggattcgcccccgcagcaatcggggctg
ttcgacgataatggttaa

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