Porphyrobacter sp. LM 6: BG023_11791
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Entry
BG023_11791 CDS
T04468
Name
(GenBank) Holliday junction DNA helicase subunit RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
porl
Porphyrobacter sp. LM 6
Pathway
porl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
porl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BG023_11791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porl03400
]
BG023_11791
Enzymes [BR:
porl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BG023_11791
DNA repair and recombination proteins [BR:
porl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BG023_11791
RecFOR pathway proteins
BG023_11791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_22
AAA_2
AAA_14
ABC_tran
AAA_17
AAA_33
nSTAND3
AAA_24
TsaE
RNA_helicase
Parvo_NS1
Rad17
AAA_18
PEPCK_ATP
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AOL93740
UniProt:
A0A1D7NIX6
LinkDB
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Position
798980..800017
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AA seq
345 aa
AA seq
DB search
MTDSPLHSPARQPGDPDAALRPRRLAEFVGQEAAKGNLAVFIAAARARGEAMDHTLFFGP
PGLGKTTLAQIIAGELGVGFRATSGPVIAKAGDLAALLTNLEPHDVLFIDEIHRLSPMVE
EVLYPAMEDRALDLIIGEGPSARSVRIDLPPFTLIGATTRQGLLTTPLRDRFGIPVRLNF
YTHAELERVVTRAAGLLGLAIEPEGAREIARRSRGTPRVAGRLLRRVRDFADVAGSASVT
RTVADEALTRLEIDRLGLDLMDRRYLAMIATTYKGGPVGIETLAAGLAEPRDTIEDVVEP
YLIQLGLVARTARGRVLNDAGWEHLEMTPPKDSPPQQSGLFDDNG
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgactgactcccccctccactcccccgcccgccagccgggtgacccggacgcggccctg
cgcccgcgccggttggccgagttcgtcgggcaggaggcagccaaggggaaccttgcggtc
ttcatcgcggccgcccgcgcacgcggcgaggcgatggatcatacgctgttcttcggcccg
ccgggtctcggcaagaccacgctggcgcagatcatcgcgggcgagctgggtgtgggcttc
cgcgccacctccggccccgtcatcgccaaggcgggcgatctcgccgcgctgctgactaat
ctcgaaccgcatgacgtgctgttcatcgacgagatccaccgcctttcgccgatggtcgag
gaggtgctctatccggcgatggaagaccgcgcgctcgatctcatcatcggcgaggggccg
tcggcgcgctcggtgcggatcgacctgccgcctttcaccctgatcggcgcgaccacgcgg
cagggcctgctgaccacgccgctgcgtgaccgtttcggcattccggtgcggctcaatttc
tacacccacgccgaactggagcgggttgtgacccgcgctgccggcctgctcggcctcgcg
atcgagcccgagggcgcacgcgagatcgctcgccgttcccgcggcacgccccgcgttgcc
ggccgcttgctcaggcgggtgcgcgactttgccgatgtggcgggcagtgcttcggtcacc
cgcacggtcgcggacgaggcgctcacccggctcgagatcgaccggctcggcctcgatctg
atggatcgccgctacctcgcgatgatcgccaccacctacaagggcggccctgtcggcatc
gagacgctggcggcgggtcttgccgaaccgcgtgacacgatcgaggatgtggtcgagccc
tatctcatccagcttggccttgtcgcccgcaccgcgcgcgggcgtgtgctcaacgatgcg
ggttgggaacatctcgagatgaccccgcccaaggattcgcccccgcagcaatcggggctg
ttcgacgataatggttaa
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